Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01000 |
Symbol | |
ID | 8385438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 100112 |
End bp | 100837 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644974204 |
Product | CAAX amino terminal protease family |
Protein accession | YP_003132015 |
Protein GI | 257054183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGAAG TCGTACTCGT TTTCTCCATC ACTTTGGGTT TATCCGCCGC TCGCAGTGCG TTGTCCTTAC TGGACGCTCT GCTGCGACCG GAGCCGTTGG CCCAGCAGCG TGTCTCCGTC AACGTGCCGC AGGCCGCGCT CAGCGTCATC GACCTGCTCA AGCAACTACT CGGAGTGGTG CAACTGGTCG GTTGGGGCGC ACTGGGCCTG TATCTGCTGT GGCGCACGGG TGTTCGACTA TCGCGAATCG GACTCGACAC CCGACGCCCC GGCAGGGACA CCGCGTGGGC GATCGCGCTC GCGGCGGGAA TCGGCGTCCC CGGACTCGTC TTCTATTTCA CCGCCTGGCA TCTCGGCTTC AACCTCGCCG TACAACCATC CACATTGGAT GAATCGTGGT GGCGCCCGAT CGCGCTCGTC CTCTCGGCGT TCGGCAACGC CTTCGCAGAA GAGGTGCTCG TGGTCGGTTA TCTGCTCACC CGACTACGTC AACTCGGACT CCCCGAGAAC ACCTCTTTAC TCATCTCGTC ACTGATCCGT GGTTCGTACC ACTTGTACCA AGGCCTCGGT GCGTTCATCG GTAACGCCGT GATGGGCTTG GTCTATGGAC GGGTCTGGCA GCGCACCAAC CGGCTGTGGC CGTTGGTCGT GGCCCACCTG CTGCTCGACG TCGTCGCCTT CGTCGGCTAC GCCGCACTGC GCGACCACGT CACGTGGCTG CCGTGA
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Protein sequence | MVEVVLVFSI TLGLSAARSA LSLLDALLRP EPLAQQRVSV NVPQAALSVI DLLKQLLGVV QLVGWGALGL YLLWRTGVRL SRIGLDTRRP GRDTAWAIAL AAGIGVPGLV FYFTAWHLGF NLAVQPSTLD ESWWRPIALV LSAFGNAFAE EVLVVGYLLT RLRQLGLPEN TSLLISSLIR GSYHLYQGLG AFIGNAVMGL VYGRVWQRTN RLWPLVVAHL LLDVVAFVGY AALRDHVTWL P
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