Gene Svir_00710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00710 
Symbol 
ID8385409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp70706 
End bp71365 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID644974175 
ProductSnoaL-like polyketide cyclase 
Protein accessionYP_003131987 
Protein GI257054155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.33863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.314412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAACT CGAAGCCGAC CCGAGTTCTT TCCGAGCACC GCGAATCCCA GCGCGACACC 
GTCACCGACA CCGCCACCGA CACCGCCACC GACGGTGTCA GTCGACCTGT CAGTCGACAC
TGTCAGTCGA CACTGTCAAT CGACGCCGGG GCGACGCTGG TCGACGCGGT GACCGCCGCC
GTGACGACCG TCCCCGGCGA GTCCTGCTCG CAAGCCGGGC GACGTCCCGC CCGGAAGGCC
CGTCCCCCGG CGAGGCCCCG CGTTCCCCAC GAGGATGGGA CGATGGACGA AAGGACCGCG
ACGACCCTCT ACCGGCGGTG GCTGGACGAG CTCTGGAACG GCGAGGACGA CCGGCTCGAC
GAAGTCGCCG CGACACTGGT GACCGCCGAT TTCGTGGGGC ACTGGCCGAA ACACCCCGGA
CTGGCCCGAG GTCCGGCACA ACTGGCCGAC ATCGTCCGAC AGGGCAGGCG ACTGGTCGAC
GACTGCGTGT TCGAACTCGT GCTCGGCCCC GTGCCCCACG ACGACCTGGT CGCCGCCCGC
TGGCGTGGCC GGGGCCGCCA CCAGGGCGAT CCGGTGACCT TCCACGGCCA CGACCTGTTG
CGTGTCGACG GTGACCGGTT CGCCGAGTAC TGGGTCATCG CCGAAGACCC CACCGACTGA
 
Protein sequence
MPNSKPTRVL SEHRESQRDT VTDTATDTAT DGVSRPVSRH CQSTLSIDAG ATLVDAVTAA 
VTTVPGESCS QAGRRPARKA RPPARPRVPH EDGTMDERTA TTLYRRWLDE LWNGEDDRLD
EVAATLVTAD FVGHWPKHPG LARGPAQLAD IVRQGRRLVD DCVFELVLGP VPHDDLVAAR
WRGRGRHQGD PVTFHGHDLL RVDGDRFAEY WVIAEDPTD