| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00680 |
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| Symbol | |
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| ID | 8385406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 66366 |
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| End bp | 68003 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974172 |
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| Product | predicted nuclease (RecB family) |
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| Protein accession | YP_003131984 |
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| Protein GI | 257054152 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2251] Predicted nuclease (RecB family) |
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| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.618336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCG AGGTGTTACT GGACGCGGGG GTCGTCACGC GGTGTCGCCG CCGCGTACAC
CTCGACCACG ATCCCACCAT GCGTGGCGCC CAGTTGGCGC CCCCTGATCC GGCTGCTGAG
CAGCGTATCG CCGATGCCAG GGAGCACAGG GCGCGGATCG CGGAATGGCT GCGGGCCGAG
ACGCCCGGTA GTTGGGCGGT CATTCCGGGG GAGTTACCCG CGGCGGAACG GGAGCGGTTG
ACGCGGGCGG CCCTGGACGA CGGGGTCGCC TACATCTGGA ACGGCCTGCT GCCGGTCGAC
GTCGACGGGG GCAGGCGCGG TGGTGTGCAA CTGCTCGTGC GGGCCTCGGA CGGCTACGTA
CCGGTGTTGG TGGTGCGGCA TCGCATCACC GATCCCGGCG AGGGCGCGTG GACGACGGTG
CTGCCGCAGG TCGATCCCGA TCGCGCGGCC GTGGACACCC GCCGCAAGGT GCGTTCACAT
CCACGGGACC AGCTGCGGTT GGCGCACGCG CGACGGTTGT TGGAGGCGGC CGGGTACGCC
GAGTCCGACA GGACGATCGG CGGGGTCGTC GGCCTGGACG CCGACGTCGT CGTCTGGCAC
GACCTCAGCG CGTCGACGTG GCCGGGCGGA CGGAATGCGC TACAGGAGTA CGACGAGAGG
TTCGCCGACC GTCTCGCCGT GGCGCGGGCC GCGGCGAGAC GGGGGGAGGC GTTGGCGAAG
CCGTCGCGCA TCCTGGAGTG CAAGCGTTGT CCTTGGTGGC CGGTGTGCGA GTCGGAGCTG
GTCCGGGATC GTGACGTCAG CCTGGTCGTC CGGGGTGAGG ACGCCGTCGA ACTCCGCAAC
GTCGGAATGT CCACAGTGGA TAAGCTGGCC GCGCTCGACC CCGAGGGGGA GTCCCCGATC
CAGTGGACCG GCACCACGTT CGCCGACGCC GTCGCCCTCG CGCGGGCGTG GTTGGCCGAT
CTCACCGTGG TGCGCAGGGT CGAGACCGTG CGGGTGCCGC GCGCCGACGT CGAAGTGGAC
ATCGACATGG AGAGCTTCGG CGACCTGGGC GCTTATCTGT GGGGTTGTCT GCTCAGCGGG
GCCGACATCG GCATCGAGCC CGGATACCGG GCGTTCGTGA CGTGGGACCC GCTGCCCACC
GACGACGAGG CGCGTTCGTT CGCGCGGTTT TGGACGTGGC TGTCGGAGGT GCGCGCCAAG
ACGGAGGCCG CGGGACTGAC GTTTCGGGCC TATTGCTACA ACGCGCTCGC CGAGAATCGG
TGGTTGTACG CGTCGGCGGA GCGGTTCGCC GGGATGGACG GCATTCCCAC TCGGCAGCAG
GTGCGGCGCT TCGTGGAGTC GGACGAGTGG GTGGACCTCT TCCGTAGTGT GTCCGACCAG
TTCCTGTGTT CGCGGGGCAA GGGCTTGAAG GTGGTGGCGC CCGTCGCCGG ATTCTCCTGG
CGGGACCCGG AGGCCAGCGG TGAGGCATCG ATGCGGTGGT ACCGCGACGC GGTGGGCATG
GACGGCGGCG CGCCCGACCT GGCGCAGCGC GAGAGGCTGC TGCGTTACAA CGAGGACGAC
GTGCGGGCCA CGTACGCGCT TCGGGCGTGG ATGAGTGACG AGGCCATGCA CGCCGTCCCG
TTCATGGGTG AGTTGTAG
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| Protein sequence | MAGEVLLDAG VVTRCRRRVH LDHDPTMRGA QLAPPDPAAE QRIADAREHR ARIAEWLRAE
TPGSWAVIPG ELPAAERERL TRAALDDGVA YIWNGLLPVD VDGGRRGGVQ LLVRASDGYV
PVLVVRHRIT DPGEGAWTTV LPQVDPDRAA VDTRRKVRSH PRDQLRLAHA RRLLEAAGYA
ESDRTIGGVV GLDADVVVWH DLSASTWPGG RNALQEYDER FADRLAVARA AARRGEALAK
PSRILECKRC PWWPVCESEL VRDRDVSLVV RGEDAVELRN VGMSTVDKLA ALDPEGESPI
QWTGTTFADA VALARAWLAD LTVVRRVETV RVPRADVEVD IDMESFGDLG AYLWGCLLSG
ADIGIEPGYR AFVTWDPLPT DDEARSFARF WTWLSEVRAK TEAAGLTFRA YCYNALAENR
WLYASAERFA GMDGIPTRQQ VRRFVESDEW VDLFRSVSDQ FLCSRGKGLK VVAPVAGFSW
RDPEASGEAS MRWYRDAVGM DGGAPDLAQR ERLLRYNEDD VRATYALRAW MSDEAMHAVP
FMGEL
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