| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00640 |
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| Symbol | |
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| ID | 8385402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 62671 |
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| End bp | 63831 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974168 |
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| Product | glycine betaine/L-proline transport ATP binding subunit |
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| Protein accession | YP_003131980 |
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| Protein GI | 257054148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.253633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACA AACCCAGTGG CGTCGAGATC CAATTGGAGA ACGTCACCAA ACGCTATCCG
GGAAGTTCCG AACCCGCTGT CGCCGACGTC AGCATGACGA TCCCGGCCGG CAAGATCGTG
ATCCTGGTGG GCCCGTCCGG GTGCGGCAAG ACCACCACCA TGCGCATGAT CAACCGACTG
ATCGAGCCGT CTTCGGGCCG CATCACGATC GGAGGCGAGG ACGTACAGGC GTTCAACGCC
GACGAGCTCC GTCGCAACAT CGGTTATGCC ATCCAGCAGG CGGGACTGTT CCCGCACTTC
ACGGTCGAGC AGAACATCGG CGTGGTGCCG GGGCTGTTGA AGTGGAGCCG CAAGCGCATC
CGGGAGCGGG TCGAGGAGCT GATGGACCTC GTCGGACTCG ACCCGGCCGA ATTCCGGGAC
CGCTACCCGC GGCAGCTGTC CGGAGGGCAG CAGCAGCGGG TCGGGGTGGC GAGGGCACTC
GCCGCCGACC CACCGGTGCT GCTCATGGAC GAACCGTTCG GCGCCGTCGA CCCCATCACC
CGCGGCCACC TTCAGGACGA GCTGCTCCGG CTCCAGGAGT CGCTGCGTAA GACGATCGTG
TTCGTCACCC ACGACTTCGA CGAGGCCGTG AAGCTCGGCG ACAGGATCGC CGTGCTCGGC
GACAAGTCGT CGATCCAGCA GTACGACACC CCCGAGGCGA TCCTGGCCCA CCCCGCCAAC
GACATGGTGG CGGGGTTCGT CGGCGCGGGC GCCTCGCTGA AGCAGCTGAC GTTGCTGCGG
GTCCGCGACG TCAGCTACAG CGACACCACG CTCACCGCGA CGATCGGCAC CTCACCCGCC
GAGCTGCACA AACGCCTGAC CGAGCAGGGG CGCACGTACG CGCTCGTCCT CGACGACCGC
CGCAGGCCGA AGCGCTGGGT GCACGTCCGT GACCTGCCCG CGGCGTCCTC ACTCACCACG
GTGGGCAGGC CCGTCGGCGA CTCGGTGAGC ACGCAGTCCA CGCTCCAGGA CGCGTTGGAG
GCCATCCTCG CCGAAGGCGG GAACGCCGTG GTCACCGGTT CGCGTGGGGA ATACGTCGGC
ACCGTCGACA TCACCACCGT CACCGACACC ATCCAGCAAC TGCGCACCGG ACACGTCGAC
TCGGAAAGTG GGCAGTCATG A
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| Protein sequence | MADKPSGVEI QLENVTKRYP GSSEPAVADV SMTIPAGKIV ILVGPSGCGK TTTMRMINRL
IEPSSGRITI GGEDVQAFNA DELRRNIGYA IQQAGLFPHF TVEQNIGVVP GLLKWSRKRI
RERVEELMDL VGLDPAEFRD RYPRQLSGGQ QQRVGVARAL AADPPVLLMD EPFGAVDPIT
RGHLQDELLR LQESLRKTIV FVTHDFDEAV KLGDRIAVLG DKSSIQQYDT PEAILAHPAN
DMVAGFVGAG ASLKQLTLLR VRDVSYSDTT LTATIGTSPA ELHKRLTEQG RTYALVLDDR
RRPKRWVHVR DLPAASSLTT VGRPVGDSVS TQSTLQDALE AILAEGGNAV VTGSRGEYVG
TVDITTVTDT IQQLRTGHVD SESGQS
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