Gene Svir_00620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00620 
Symbol 
ID8385400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp61342 
End bp61908 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID644974166 
Producthypothetical protein 
Protein accessionYP_003131978 
Protein GI257054146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.184009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCC GTTCCGCCTC CGACCGCATG ATGCGTGGCA TACGCGGAGT GCTGCTTGCG 
GGGTGCTCGG CCACGCTCAG CGTGGCGGCG CACGCTCTCG GCGGAGGCCC CCTTCCCCAC
CTGCTCCCCA CACTCGCGCT GACCGTGTTG ATCGGGTGGG TCTCGACCGC GCTCGCGGAG
CAGACGCGTG GCCTCGGAGG TGTCCTGATC GTCCTGGGCA GCGCCCAGCT GGTGTCCCAC
CTGCTCCTGG GCGAGCTGTC GGGGCACACG GTCAACAGCC CCGCCATGCT GACCTGTCAC
GGTGTCGCCA CCTTCGCCAC CGCGTTCGTG CTGGCCCGCG CGGAAGCGAT GCTTGCCATG
GCGGCCGCCG TGCTGTCGCT GTTACGTGGA CTGTTCGTCG TGTGTGTCGC CTCGCCCGGG
CGCATGGAGC AGCGGGGTGG ACATCCCGTC GTCCGCACGG CCGAAGGTCT GTCCGCCGTG
GCTGTGCTGC TCCGGCGTGC GCATCCCCGA CGCGGTCCGC CGTCGACCCT CCTGACCAGC
TCCGAAAGAC ATCCGGCGTC TGTATGA
 
Protein sequence
MSPRSASDRM MRGIRGVLLA GCSATLSVAA HALGGGPLPH LLPTLALTVL IGWVSTALAE 
QTRGLGGVLI VLGSAQLVSH LLLGELSGHT VNSPAMLTCH GVATFATAFV LARAEAMLAM
AAAVLSLLRG LFVVCVASPG RMEQRGGHPV VRTAEGLSAV AVLLRRAHPR RGPPSTLLTS
SERHPASV