| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00510 |
|---|
| Symbol | |
|---|
| ID | 8385389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 49691 |
|---|
| End bp | 51049 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644974155 |
|---|
| Product | FAD-linked oxidoreductase |
|---|
| Protein accession | YP_003131967 |
|---|
| Protein GI | 257054135 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01679] FAD-linked oxidoreductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.740797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGT GGACGAACTG GGCGGGCACC GCCTCGGCAC GACCACGTCG AGTCCACCGT
CCGACGGACA CGGCCGAGCT GTGCGCGATC GTCGCCGAGA CGGCCGAACG CGGTGGACGC
ATACGTCCGC TGGGAAGCGG GCACTCGTTC AGCCCCATCG CCGCCGCTGA CGACGACACC
GACGTCATCG ACCTGAGCGC GTTCACCGGT ATCGTCTCGG CCGACGCCGG GAACGGGCTG
GTCACCGTAC GTTCGGGCAC GACGCTGCGC GAGCTCAACA CACTTCTGGC CGCGCTCGAC
CTGGCACTGA CCAACCTCGG TGACATCGAC GCGCAGACCA TCGCCGGTGC GATCTCCACG
GGGACGCACG GCACCGGTGC CCGATTCGGA GGACTCGCCA CCCAGGTGGA GGCCCTGGAG
CTGGTCACAG CCGACGGGTC CGTCCTCACC TGTTCACCCA CCGAACGTCC GGAGCTGTTC
GACGCCGCCA GGGTCGGACT CGGCGCGCTC GGGGTCATCA GCACCGTCAC CCTACGCTGC
GAACCCGCAT TCCTCCTGGA GGCACACGAA AGCCCGCAAC CGCTCGACCG CGTACTCACC
GATTTCCACG CGCTGGCCGA CGGCACCGAC CATTTCGAGT TCTACTGGTT CCCTTACGGT
CGCAACGCAC TGGTCAAACG CAACACCCGA CTCCCCGTCG GCACTCCGGC ACGCCCGCTG
TCCCCCGTGC GCCGATTCCT CGACTACACC CTCATGGAGA ACGCGGCTTT CGGCGGCCTG
TGTCGCCTGA GCAGGGCCGT GCCCCGGCTC GCCCCGACAC TCGGCGCGTT GGCGTCGTCG
GCGTTGTCCA CCCGTCGCTA CAGCGACGCC TCCTACCGCG TGTTCACCAC CCAACGCCTG
GTCAGGTTCG TGGAGACGGA GTACGCGGTG CCACGCGAAT CGGTCCTCGA CGTCCTCGCC
GAACTCCGCG CGCTCGTACC CCGACTGCGC CATCCGGTGG CGTTCCCCGT CGAGGTACGG
GTGGCCGCCG CCGACGACAT CTGGTTGTCC ACGGCCTACG GCCGGGACAC CGCCTACGTG
GCCGTGCACC AGTACGTCGG CATGCCGTAC GAGGAGTACT TCACCGAGTT CGCCCGCATC
GCCGCGTCGG TGGGCGGACG TCCGCACTGG GGCAAGATGC ACCCGCTCGA CGCGGACGAA
CTGCGCCACC TGTACCCGCG GTTCGACGAC TTCCGACGGA TGCGGGCCGC ACTGGACCCC
GGCGGCGTGT TCTCGAACGC CCACCTCGAC CGCATCCTCG GAAAACCATC CGAACAAAAC
GACAGTGCGG GCCTCGTCGG ACCCACTTTT CGATCCTGA
|
|---|
| Protein sequence | MSQWTNWAGT ASARPRRVHR PTDTAELCAI VAETAERGGR IRPLGSGHSF SPIAAADDDT
DVIDLSAFTG IVSADAGNGL VTVRSGTTLR ELNTLLAALD LALTNLGDID AQTIAGAIST
GTHGTGARFG GLATQVEALE LVTADGSVLT CSPTERPELF DAARVGLGAL GVISTVTLRC
EPAFLLEAHE SPQPLDRVLT DFHALADGTD HFEFYWFPYG RNALVKRNTR LPVGTPARPL
SPVRRFLDYT LMENAAFGGL CRLSRAVPRL APTLGALASS ALSTRRYSDA SYRVFTTQRL
VRFVETEYAV PRESVLDVLA ELRALVPRLR HPVAFPVEVR VAAADDIWLS TAYGRDTAYV
AVHQYVGMPY EEYFTEFARI AASVGGRPHW GKMHPLDADE LRHLYPRFDD FRRMRAALDP
GGVFSNAHLD RILGKPSEQN DSAGLVGPTF RS
|
|---|
| |