| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00420 |
|---|
| Symbol | |
|---|
| ID | 8385380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 38899 |
|---|
| End bp | 40119 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644974146 |
|---|
| Product | FHA domain-containing protein |
|---|
| Protein accession | YP_003131959 |
|---|
| Protein GI | 257054127 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.110942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.295501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGCG TACAACGCTT CGATCGGCGC CTCGAAAACC TCGTGGGTAG TGCCTTCGCA
CGAATATTCG GTGGCAACGT CGTCACGCAA GAAGTGGCGT TGGAACTGGA GCGAGAGTGT
GAGGACAACG TCCGGGACCT CGCAGGCGGG CGCAAGCTCG CACCCAACCA CTACATTGTG
TCGCTGGGAG CCGAGGATTA TGACCGGATG GCGGCGGACG GGCCGCGGGT TACCCGCATG
CTCGCCGAAG CAGTCTCGGA GCATCTCGCT GAGCACGGTT GGGACACCTA TGGTGACGTC
GTAGTTTCGC TAGAGCGCGA CGAGGCGCTG CATACTGGAA AGTTCAAAAC CCGCTCGACC
GTCGACCCGG ACGTCAAGGC AAGCGACGCC GGGACTTTCG CACGGTCGGC ATCAAAGAGC
GACGCAGGAG ACCGACCAAT GAGCCAGCCC GGCGGCTACG GCCAATACGA CCAGGGTGAC
CCGTACGGCC AGCAGGGCCA GTACGGCTAC GGACAGGGAC AGCCCGGTTA CGACCAGGGC
TACGGCCAGC CCGGCGGCTA TGACCAGGGC TACGGCCAGC CCGGTGGCTA TGACCAGGGC
TATGGGCAGC CTGGTTACGA CCAGGGTTAC GGGCAGCCCG GTGGCTATGA CCAGGGCTAT
GGGCAGCCTG GTTACGACCA GGGTTACGGG CAGCCCGGTG GCTATGACCA GGGCTATGGG
CAGCCTGGTT ACGACCAGGG TTACGGGCAG CCCGGTGGCT ATGACCAGGG CTACGGCCAG
CCCGGCTATG ACCAGGGTTA TGCGGCTCCG CCGAGCCCTC CCGGTGGTTA CCCCGCCCAG
ACTCCGCCGC CCCCTCCCGG TGGTGGCGAC CCGTACGCTC AGCAGCAGGG CGGCTACCCG
GGTGGCGGCA TGCCTCCGGC CGGGAACCGT CAGCTCACAG CCATCCTGCA GCTCGACGAC
GGTTCGAACC GGACCTACTC GCTCAAGCAG GGCGGCAACG TGATCGGCCG AGGCCAGGAT
GCCGACTTCC GGCTTCCCGA CACCGGTGTC TCTCGTCGTC ACCTCGAGAT CACCTGGGAC
GGCCAGAGCG CGACGTTGGC GGACATCGGT TCCACCAACG GCACCACGGT GAACGGCACC
CCGGTGCAGA CCTGGCAGCT CGCCGACGGC GACGTCATCA GGGTCGGCCA CTCTTCGTTG
GTGTTCCGCA CCCAGGGCTG A
|
|---|
| Protein sequence | MGRVQRFDRR LENLVGSAFA RIFGGNVVTQ EVALELEREC EDNVRDLAGG RKLAPNHYIV
SLGAEDYDRM AADGPRVTRM LAEAVSEHLA EHGWDTYGDV VVSLERDEAL HTGKFKTRST
VDPDVKASDA GTFARSASKS DAGDRPMSQP GGYGQYDQGD PYGQQGQYGY GQGQPGYDQG
YGQPGGYDQG YGQPGGYDQG YGQPGYDQGY GQPGGYDQGY GQPGYDQGYG QPGGYDQGYG
QPGYDQGYGQ PGGYDQGYGQ PGYDQGYAAP PSPPGGYPAQ TPPPPPGGGD PYAQQQGGYP
GGGMPPAGNR QLTAILQLDD GSNRTYSLKQ GGNVIGRGQD ADFRLPDTGV SRRHLEITWD
GQSATLADIG STNGTTVNGT PVQTWQLADG DVIRVGHSSL VFRTQG
|
|---|
| |