Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00400 |
Symbol | |
ID | 8385378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 36850 |
End bp | 38286 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974144 |
Product | serine/threonine protein phosphatase |
Protein accession | YP_003131957 |
Protein GI | 257054125 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.784973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCTCG TCCTACGCTA CGCGGCCCGC AGTGATCGAG GCCTGGTTCG GTCGAACAAC CAGGACTCGG TGTATGCCGG CCCTCGTCTA CTCGCGCTCG CCGACGGCAT GGGCGGACAT GCCGCCGGTG AGGTCGCCAG CAAAGTTGTC ATCGCCTCGC TGGCACATCT CGACGATGAC GAGCCCGGCG ACGATCTGGT TACCCAACTG CGCGAAGCCG TGAACCAAGG GAACCAGGCG ATCTCCGAAC TCGTCGCGGG TGACCCCGAA CTCGACGGGA TGGGGACCAC CCTGACCGCG GTGTTGTTCT CCGGTTCCCG GCTCGGCCTC GTACACGTAG GCGACTCCCG TGCCTACTTG CTGCGCAACG GGCAGTTCTC CCAGATCACC CGGGACGACA GCTTCGTCAA CGAGCTGTTG GAGCAGGGAC GTATCACCGA GGAGGAGGCC GCGACGCACC CGCAGCGATC CCTGCTGCTG AAGGCGCTCA CCGGCCACGA GGTCGAGCCG AGCGTCACGG TGCGGGAGGC TCGCGCGGGC GACCGATACC TGCTGTGCTC CGACGGATTG TCGGGCATGG TGAGCGACGA GACGCTCGCC GAGGCCCTGC GTATCCCGGA CCCACAGGAA TGCGCCGACC GGATGATCGA GTTGGCGCTC AAGGGCGGTG GCACCGACAA CGTCACGGTG ATCGTGGCCG ACGTCGTCGA CGTGGACTTC GGCGAGGACG CCCCCATCGT CGGCGGCGCC GCCGGTGACG GGACCGACGA GGGACCGCCG GTCGACTCCC CCGCCGCACG GGCGCGCGCG CTCACCGCGC CGCCCCCTCC ACCGCCGGTC CCGCAACAAA CCGAGCAGCT GGAGACACAA CCCGACCCCA AGGCCAAACG ACGTAAGCGG CTCCGTCTGC TGCTGGCTTT CGGGCTCGCC CTCGTGCTGT TGGCCGCGGC GGCCTTCGCC ACCCGGTACT TCGTACTGCG GCAGTACTAC GTCGGGGTCG ACGAGGAGAC CTCCGAGGTC GTGGTCTACC AAGGTGTTCC CGGCAGCATC CTCGGGTTCA AACTGCAGCA GAAGGCCGAA GGATCCTGCC CACCCGAGGC GTCCCTGTGC GATCCGCTGA TGCTCGAGGA TCTTCAGCAG GACGCGCGTG CGGCTGTGAG CAACGGTGTC AAGCGGGACG GTCTCGTCGA ATCACGCGAG TACATCAACA CGCTTCGCCA CAACAACATG CTGGAAATCT GCGACGACGA ATCCGACCAG GCGCAAGGCG GTGGTCTCGG GGGAATCGAG CAGGGCGGCG AAACACAGGA CGCGGCCGAG GGAGCGACCC CCGGTGCGCC GAACGAACCG ACCAACACGA CGGCGGCGGG GCGGAACGAG GGCGGACAGC GACCGGGTGT GGACTGCCGC CCGGCGCCCA GCTCGGGCGG TAACTGA
|
Protein sequence | MTLVLRYAAR SDRGLVRSNN QDSVYAGPRL LALADGMGGH AAGEVASKVV IASLAHLDDD EPGDDLVTQL REAVNQGNQA ISELVAGDPE LDGMGTTLTA VLFSGSRLGL VHVGDSRAYL LRNGQFSQIT RDDSFVNELL EQGRITEEEA ATHPQRSLLL KALTGHEVEP SVTVREARAG DRYLLCSDGL SGMVSDETLA EALRIPDPQE CADRMIELAL KGGGTDNVTV IVADVVDVDF GEDAPIVGGA AGDGTDEGPP VDSPAARARA LTAPPPPPPV PQQTEQLETQ PDPKAKRRKR LRLLLAFGLA LVLLAAAAFA TRYFVLRQYY VGVDEETSEV VVYQGVPGSI LGFKLQQKAE GSCPPEASLC DPLMLEDLQQ DARAAVSNGV KRDGLVESRE YINTLRHNNM LEICDDESDQ AQGGGLGGIE QGGETQDAAE GATPGAPNEP TNTTAAGRNE GGQRPGVDCR PAPSSGGN
|
| |