Gene Svir_00320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00320 
Symbol 
ID8385370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp27034 
End bp27804 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID644974136 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003131949 
Protein GI257054117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.48619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.068604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA GTCAACGCCC GGGAGCACGT CCTGATGCGC GTCCCGAGCT GCCCGGTGTC 
CTCGCCCGCA TGTGGGGGCG CGAGCCGACA CCTCGCCGGG GTCCGAAGCC GAGCCTCGAT
CTCGCCCGGA TCACCGAAGC CGCCATCACG ATCGCCGACG CCGACGGTCT CGCCGCGGTT
TCGATGAGCA GCGTCGCCTC TCGGCTCGGT GTCGCCCCGA TGTCGCTTTA TCGCTACGTG
GACAGTAAGG ACGAACTGCT GCTCGCCATG CTCGACGCCG CGAGCGGCGA TCCGCCCCCC
GTCGGCGGGC TCTCCCGGCG CGACTACCTC TTTCGGTGGA CCAAAGCCCA TGTCGAGACG
TTCCTCGCCC GCCCCTGGCT GCTGTCCATC GCCCGAGGCG GTCCCCCGCT CGGCCCGCGG
GGATTGCTGT GGCTCGAGCA GCTGCTCACC GCGCTCGACG ACACCCCACT CGACGGCGAG
GAGAAGATCC TCATCGCCAC CACGCTCAGC GGCTACGCCC TCAACGAGGC GTCACTGATC
ATCGCTTTGG AGCGATCGCC GAAGCAGGGC TCCCAACCCT CCAGCTCGGC CGCATACGGA
GAGCTGATCG CCGAACTCGT GGATCGGAGG ACCTACCCGC GACTCGCGGA AATCGCCCGG
GGCCACACCT TCGCCGCGGC AGAGGGCGCC TGGATCGACG AGAAGGACTT CCGATTCGGC
CTCGACCTGC TCCTCGACGG CATCGACGCG TTGATCGCGC GTCGTTCGTG A
 
Protein sequence
MTDSQRPGAR PDARPELPGV LARMWGREPT PRRGPKPSLD LARITEAAIT IADADGLAAV 
SMSSVASRLG VAPMSLYRYV DSKDELLLAM LDAASGDPPP VGGLSRRDYL FRWTKAHVET
FLARPWLLSI ARGGPPLGPR GLLWLEQLLT ALDDTPLDGE EKILIATTLS GYALNEASLI
IALERSPKQG SQPSSSAAYG ELIAELVDRR TYPRLAEIAR GHTFAAAEGA WIDEKDFRFG
LDLLLDGIDA LIARRS