Gene Svir_00210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00210 
Symbol 
ID8385359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp18624 
End bp19289 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID644974125 
Productresponse regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein 
Protein accessionYP_003131938 
Protein GI257054106 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.133182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGG AACCGATCCG AGTACTCGTC GTCGACGACC AGCAGCTGGT GCGCGAAGGA 
CTCACGGCGT TACTGGAGCT GACCGAGGAT GTCGAGGTCG TCGGCCAGGC CGCCCATGGA
CGGGAAGCCC TCGACATCCT GACCCGGAAG CCCTGCGACG TCGTCCTGAT GGACCTGCGC
ATGCCCGTGC TCGACGGCGT CGCCGCGACC CGCGAAATCC GCAATCGCCA CCCGGAAGTA
GCGGTGCTCG TACTGACGAC GTACTCCGAC GACGACTCGA TCCGCGACGC TCTCGGGGCC
GGCGCACAGG GCTACTTGAC GAAGGATGCC GGTCGCGCGG AGATCCACGC GGCGCTGCGG
GCGGCGGTGA CGGGCCAAGC GACGTTCACC ACCGCCGTGT CACGACGGCT GGTGACAGCG
CTGACCGAAC AACGGCCTCG GCCCTCGGAA CCCACGCCCG ACCCGAGTGC GACGACGCTC
ACCGCCAGGG AACGCGAAAT CCTCGGTCTC ATCGGCGCGG GACTGAGCAA CGCCGAAATC
GCCGCGCGGC TCTTCATCGC CGAAAGCACG GTGAAAACCC ACATCAACAA CGCGTTCGCC
AAGATCGGTG TACGTAATCG CGCCGGCGCC GTACGGTACG CCTACCAAAC CGGCCTGGTG
CGCTGA
 
Protein sequence
MNGEPIRVLV VDDQQLVREG LTALLELTED VEVVGQAAHG REALDILTRK PCDVVLMDLR 
MPVLDGVAAT REIRNRHPEV AVLVLTTYSD DDSIRDALGA GAQGYLTKDA GRAEIHAALR
AAVTGQATFT TAVSRRLVTA LTEQRPRPSE PTPDPSATTL TAREREILGL IGAGLSNAEI
AARLFIAEST VKTHINNAFA KIGVRNRAGA VRYAYQTGLV R