| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00200 |
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| Symbol | |
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| ID | 8385358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 17237 |
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| End bp | 18430 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644974124 |
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| Product | predicted membrane protein |
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| Protein accession | YP_003131937 |
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| Protein GI | 257054105 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2311] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.220914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCACG AAAGACCGAA CTCCTCCGCC TCACCGGGTG GTACGCGTAT CGACGCACTC
GACCTCGCCA GAGGCATCGC CATCCTCGGG ACCCTCGGCA CCAACATCTG GATCTTCACC
GATCCGGCGG GTGCGTTCGG GTGGGTCTCG CCGCAAGGCG ACGGTCCCGT CGAGGGGGTC
GTCGAGACGT TGCTGCTCAC GCTGTCGAAC GGCAAGTTCC TCGCACTGTT GTCGATCCTT
TTCGGGGTCG GACTGGAATT GCAGTACCGC TCGGCGGCGC GACGAGGGCG ACGTTGGCCG
GGCAGGTACC TGCTGCGAGC GCTGTTGCTG TTCGTCGAAG GCCTACTGCA CTACTTACTG
ATCTTCGAGT TCGACGTACT CACCGGCTAT GCGATCGTCT CGGTACACGT CGCGTTCCTG
GTAGCACGCA GGGACCGCGT GCGACGGACG TGGCTGGCCA TAGCCGCCGC TGTGCACCTG
CTGTTGATCG GGTTCCTGAC GTCGGTGCTG CTCACCGGGA ACATCACACT GTCCGGCGAA
GAACAGACGA CGACCGATCT CTACACATCG GCGAGCTGGG CTGAACAGGT ACTGACACGC
ATCGAACTGG CCGGCATGTT CCGCGCCGAA CTGATTATCA TCATCCCACT GTCCACAGTG
CTGTTCCTGG CGGGAATCGA GGTGCTGCGC GCGGGTACGT TCGAGGCGAG TGAACGCGGG
AAGCACGTGC GGCGTCGGAT GCTCGTTCTC GGGCTCGGCA TCGGTTTTCC ACTGAACCTC
GTGACCGCTT TCGCGGGAGT CGAGTGGTTC TTCGTCGACC GCTATGTCCT GCCGCCTATC
GTCGCTTTCG GACTATTGGC GGCCATTGTG GAGGCCGCCG AGCGCACACG TGGGGGCCTG
CTGAGAAAAG GACTCATCGC GACGGGCCGG ACCGCCATGA CGTGTTACGT GTTCCAGAAC
CTGATATGCA GTGTGCTCTG CTACGGCTGG GGGCTGGGTC TCGCGGTGAC CTTCGCGGAC
GCTGGACCGT GGTGGGTCGT GGCGCTCTGG GCCGGCGTGG TGGCGTTGTT CATGTCGCTG
GCATGGCTGT GGCTGCGACG CTTCACCCGC GGACCACTGG AGCTGATTCT ACACCGAGTC
TACAGCGGAC GACGCGCTCG GGAGAGTACC GATCGGATTC CCGTGCGGGA GTAG
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| Protein sequence | MNHERPNSSA SPGGTRIDAL DLARGIAILG TLGTNIWIFT DPAGAFGWVS PQGDGPVEGV
VETLLLTLSN GKFLALLSIL FGVGLELQYR SAARRGRRWP GRYLLRALLL FVEGLLHYLL
IFEFDVLTGY AIVSVHVAFL VARRDRVRRT WLAIAAAVHL LLIGFLTSVL LTGNITLSGE
EQTTTDLYTS ASWAEQVLTR IELAGMFRAE LIIIIPLSTV LFLAGIEVLR AGTFEASERG
KHVRRRMLVL GLGIGFPLNL VTAFAGVEWF FVDRYVLPPI VAFGLLAAIV EAAERTRGGL
LRKGLIATGR TAMTCYVFQN LICSVLCYGW GLGLAVTFAD AGPWWVVALW AGVVALFMSL
AWLWLRRFTR GPLELILHRV YSGRRAREST DRIPVRE
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