Gene Svir_00170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00170 
Symbol 
ID8385355 
Type 
Is gene splicedNo 
Is pseudo geneYes 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp15783 
End bp16469 
Gene Length687 bp 
Protein Length 
Translation table 
GC content69% 
IMG OID645946229 
Product 
Protein accession 
Protein GI 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.127874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTTCC TCGAAACGAA CGGCGCTCCT CTGATCACGG ATGGTGGTTT GGCGACCGAG 
CTTGAGGCGC GCGGGCATGA TCTCTCGGAC CCTTTGTGGT CGGCGCGGTT GTTGGTGGAC
GCTCCCGAGG AGATCAAGGC CGCTCACCTG GCGTTCTTCC GCGCGGGCGC CGTGATCGCG
ACGACGGCGA GCTACCAGGC ATCCTTCGAT GGCTTCGCGG AGCGGGGCAT CGGGCGGGAT
GACGCTGGTC GGTTGTTGCG GCGCAGCGTC GAGCTGGCGC AGGCTGCCCG CGCTGAGATG
GCCGATGACG GGCGTGAGCG GTGGGTGGCG GCCTCGCTCG GCCCGTATGG TGCAGCCTTG
GCCGATGGGG CGGAGTGTCG GGGCCGCTAC GGGTTGAGCG TGGCTGAGTT GGCGGCATGG
CACCGTCCCC GCCTGGAGGT GCTGGCGGAC GCGGGGCCGG ATGTGCTGGC GCTGGAGACG
GTGCCGGACA TCGACGAGGC GGAAGCGTTG ATGATCGTGG TTTCCGGGAT CGGCATTCCT
GCGTGGCTGA CATACAACAT CGACGGGGAT CGCACGCGCG CCGGGCAACC GATGGCGGAG
GCGTTCGCGC TCGCCAGGGA TGTGCCGGAG GTTGTGGCAG TGGGCGTCAA CTGTTGTGCC
CCGTCCGACG TGCCAGCCGC GACCGAC
 
Protein sequence