Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_00100 |
Symbol | |
ID | 8385348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 12785 |
End bp | 13552 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974116 |
Product | nucleotidyltransferase family protein |
Protein accession | YP_003131930 |
Protein GI | 257054098 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.994546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.283746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGACA GAGGATTCCT CGCCTACGTC TCCTCCCGCC TGGCCGAACT ACCCGGGGTC GAGGCTGTGT CGCTGGGTGG TTCCCGTGCC GTGGGCAACC ATCGACCGGA CAGCGACTGG GACTTCGCGA TCTACTACCG CGGCGAGTTC TCCCCCGACC ACTTGCGCGC CATCGGTTGG CCGGGCGAAG TGAGTGAGAT CGGCGCGTGG AGTCCCGGGG TGTTCAACGG CGGCGCGTGG CTACGCATCG ACGACCGCCC CGTGGACGTG CACTACCGCG ACCTCGACTC GGTCGAACAC GAACTGTCGG AGGCCCGCCA AGGCCGCTTC CGCTACGAAC CCCTCATGTT CCACTTGGCA GGCATCCCCA CCTACCTCGT GGTGGCGGAA CTCACCTTGA ACCGGGTTCT GCACGGGACT CTGCCCAAGC CCGACTACCC GGAGGCACTG CGACAGAACG CGCCGGACGC GTGGTGGAAC ATGGCCGAGC TCACCTTCAC CTACGCCAAG GCCAACCACG CCCCATACGG GCGGCTCGCC CAGTGTCTCG CCCTGACCGT GCAGGGGGCG TCTCAGGCCG CGCACGCGGT GCTCGCCGCT CGCGGCGAAT GGATCACCAA CGAGAAGACA CTCCTGTCCC GCGCCGGTCT CACCGAGGTG AACGACATCG TCGCCCGAGC CGACAACGAC AGTCTGGGCG ACACGGTGGC CGCGGTGCGG GACCTGTGTG CCCGAACCCT CGACGCCGCA CGAACGGCCT CCGCATGA
|
Protein sequence | MTDRGFLAYV SSRLAELPGV EAVSLGGSRA VGNHRPDSDW DFAIYYRGEF SPDHLRAIGW PGEVSEIGAW SPGVFNGGAW LRIDDRPVDV HYRDLDSVEH ELSEARQGRF RYEPLMFHLA GIPTYLVVAE LTLNRVLHGT LPKPDYPEAL RQNAPDAWWN MAELTFTYAK ANHAPYGRLA QCLALTVQGA SQAAHAVLAA RGEWITNEKT LLSRAGLTEV NDIVARADND SLGDTVAAVR DLCARTLDAA RTASA
|
| |