Gene Svir_00100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_00100 
Symbol 
ID8385348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp12785 
End bp13552 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID644974116 
Productnucleotidyltransferase family protein 
Protein accessionYP_003131930 
Protein GI257054098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.994546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.283746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA GAGGATTCCT CGCCTACGTC TCCTCCCGCC TGGCCGAACT ACCCGGGGTC 
GAGGCTGTGT CGCTGGGTGG TTCCCGTGCC GTGGGCAACC ATCGACCGGA CAGCGACTGG
GACTTCGCGA TCTACTACCG CGGCGAGTTC TCCCCCGACC ACTTGCGCGC CATCGGTTGG
CCGGGCGAAG TGAGTGAGAT CGGCGCGTGG AGTCCCGGGG TGTTCAACGG CGGCGCGTGG
CTACGCATCG ACGACCGCCC CGTGGACGTG CACTACCGCG ACCTCGACTC GGTCGAACAC
GAACTGTCGG AGGCCCGCCA AGGCCGCTTC CGCTACGAAC CCCTCATGTT CCACTTGGCA
GGCATCCCCA CCTACCTCGT GGTGGCGGAA CTCACCTTGA ACCGGGTTCT GCACGGGACT
CTGCCCAAGC CCGACTACCC GGAGGCACTG CGACAGAACG CGCCGGACGC GTGGTGGAAC
ATGGCCGAGC TCACCTTCAC CTACGCCAAG GCCAACCACG CCCCATACGG GCGGCTCGCC
CAGTGTCTCG CCCTGACCGT GCAGGGGGCG TCTCAGGCCG CGCACGCGGT GCTCGCCGCT
CGCGGCGAAT GGATCACCAA CGAGAAGACA CTCCTGTCCC GCGCCGGTCT CACCGAGGTG
AACGACATCG TCGCCCGAGC CGACAACGAC AGTCTGGGCG ACACGGTGGC CGCGGTGCGG
GACCTGTGTG CCCGAACCCT CGACGCCGCA CGAACGGCCT CCGCATGA
 
Protein sequence
MTDRGFLAYV SSRLAELPGV EAVSLGGSRA VGNHRPDSDW DFAIYYRGEF SPDHLRAIGW 
PGEVSEIGAW SPGVFNGGAW LRIDDRPVDV HYRDLDSVEH ELSEARQGRF RYEPLMFHLA
GIPTYLVVAE LTLNRVLHGT LPKPDYPEAL RQNAPDAWWN MAELTFTYAK ANHAPYGRLA
QCLALTVQGA SQAAHAVLAA RGEWITNEKT LLSRAGLTEV NDIVARADND SLGDTVAAVR
DLCARTLDAA RTASA