| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_00060 |
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| Symbol | |
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| ID | 8385344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 7083 |
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| End bp | 9047 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974112 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_003131927 |
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| Protein GI | 257054095 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0159442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.243862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCGA AGAACAGCGA ATACAGTGCG TCCTCCATCA CGGTGCTCGA GGGCTTGGAG
GCGGTCCGCA AGCGCCCCGG CATGTACATC GGTTCAACCG GTGTACGTGG CTTGCACCAC
CTGATCCAGG AGGTTGTGGA CAACTCCGTC GACGAGGCGA TGGCCGGTTA TGCCAGCCGC
GTCGAGGTCA CGTTGTTGGC CGACGGTGGT GTCCGCGTCG TCGACGACGG ACGTGGCATC
CCGGTCGAAC CCCACCCGGT GCACGGCAAA CCCACGGTGG AGATCGTGCT GACGCAACTG
CACGCGGGTG GCAAGTTCGA CAGCGACTCC TACGCCGTGT CGGGTGGTCT GCACGGCGTC
GGCGTCTCGG TGGTGAACGC TCTTTCGAGC GCACTCGAGG TGGAGATCCA CCGTGACGGC
AGGATCTGGG CCCAGCGCTA CGAGAACTCG GTGCCCGGTG AACTGGTGGA CAAGGGGCCC
ACCGACCGCA GTGGTACGAG CGTCACGTTC TGGGCCGACC CCGAGATCTT CGAGACCACG
GAGTACAACG CCGAGACCGT GGCCCGGCGG CTGCAGGAGA TGGCCTTCTT GAACAAGGGG
CTGACCATGA TCCTGCGTGA CGAGCGGGTG ACGGACGAGG AGGGCGAGGA CGCCACCGGC
GAACGCGCTC AGCTCAAGGA GCGCACCTAC TACTACCCGG GTGGTCTGGA GGACTTCGTC
AAATACATCA ACGCCTCCAG GGAGGCCATC CACCCGAGCG TGATCTCGTT CGAGCAGAAG
GGGGACGGCC TCGAGGTCGA GGTGGCGATG CAGTGGAACG ACGGCTACAC ACCGTCGGTC
TACACGTTCG CCAACACGAT CAACACACAC GAGGGCGGTA CGCACGAGGA GGGCTTCCGC
GCCGCGTTGA CCCGGGTGGT GAACGCCTAT GCGCGCGACA AGAAGCTGCT CAAGGAGAAG
GACGCCAACC TCACCGGTGA CGACGTCCGC GAAGGGCTCG CGGCGATCGT CTCCATCAAG
CTGACCGAGC CGCAGTTCGA GGGGCAGACG AAGACGAAAC TCGGCAACAG CGAGGCGCGG
TCGTTCGTGC AGACCGCCTG CAACGAGTGG CTGGCCGACT GGTTCGAGCG CAACCCCACC
GAGGCCAAGC TCATCATCAA CAAGGCGGTG TCGAGCGCGC AGGCGCGGCT GGCCGCGCGT
AAGGCACGGG ACCTCGTGCG CCGTAAGGGC GCGATGGACA TCGGTGGTCT GCCCGGCAAG
TTGAAGGACT GCCGCTCCAA CGACCCCGAG GAGTGCGAGC TCTACATCGT CGAGGGCGAT
TCGGCGGGTG GTTCCGCCAA GGAGGGTCGG GACTCGCGGT TCCAGGCGAT CCTGCCGATC
CGAGGAAAGA TCATCAATGT CGAGAAGGCG CGCATCGACA AGGTGTTGAA GAACCAGGAG
GTCCAGTCGC TCATCACCGC GCTGGGCACC GGTATCCACG ACGACTTCGA CATCTCGAAG
CTGCGCTACC ACAAGATCGT GATCATGGCC GACGCCGACG TCGACGGCCA GCACATTCGC
ACGCTGCTGT TGACGTTGTT GTTCCGATTC ATGCGTCCGC TGGTGGAGCA GGGCCATGTC
TACCTCGCCC AGCCGCCGCT CTACAAGATC AAGTGGCCGC GCATGGAACC CCAGTACGCC
TACAGCGATC GGGAACGGGA CGGTCTGCTG CGCGCGGGTG CCGAGGCCGG GCGGAAACTG
CCGAAGGACG ACGGCATCCA GCGGTACAAG GGCCTCGGTG AGATGAACGC CGAGGAGCTG
TGGGAAACCA CGATGGACCC GAGCAACCGC GTGTTGTTGC AGGTCACCCT CGATGACGCC
GCTCAGGCCG ACGAGCTGTT CTCCGTGCTG ATGGGCGAGG ACGTCGAGGC GCGCCGTTCT
TTCATCACCC GTAACGCCAA GGGTGTGCAG TTCCTGGACG TCTAG
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| Protein sequence | MAAKNSEYSA SSITVLEGLE AVRKRPGMYI GSTGVRGLHH LIQEVVDNSV DEAMAGYASR
VEVTLLADGG VRVVDDGRGI PVEPHPVHGK PTVEIVLTQL HAGGKFDSDS YAVSGGLHGV
GVSVVNALSS ALEVEIHRDG RIWAQRYENS VPGELVDKGP TDRSGTSVTF WADPEIFETT
EYNAETVARR LQEMAFLNKG LTMILRDERV TDEEGEDATG ERAQLKERTY YYPGGLEDFV
KYINASREAI HPSVISFEQK GDGLEVEVAM QWNDGYTPSV YTFANTINTH EGGTHEEGFR
AALTRVVNAY ARDKKLLKEK DANLTGDDVR EGLAAIVSIK LTEPQFEGQT KTKLGNSEAR
SFVQTACNEW LADWFERNPT EAKLIINKAV SSAQARLAAR KARDLVRRKG AMDIGGLPGK
LKDCRSNDPE ECELYIVEGD SAGGSAKEGR DSRFQAILPI RGKIINVEKA RIDKVLKNQE
VQSLITALGT GIHDDFDISK LRYHKIVIMA DADVDGQHIR TLLLTLLFRF MRPLVEQGHV
YLAQPPLYKI KWPRMEPQYA YSDRERDGLL RAGAEAGRKL PKDDGIQRYK GLGEMNAEEL
WETTMDPSNR VLLQVTLDDA AQADELFSVL MGEDVEARRS FITRNAKGVQ FLDV
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