| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2984 |
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| Symbol | |
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| ID | 8385293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 3073822 |
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| End bp | 3074796 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644974062 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003131878 |
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| Protein GI | 257054045 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.627737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTT CCGAAACATG GGGTCCGGAG GCGATGGGCG ACCAGTCGGA GAAGACTGTC
GTCGTCACGG GAGCCAACAG CGGGATCGGT TTCGAGGTGA CGAAAGCGTT CGCCGAGAAT
GGTGCTCGCG TGGTCATGGC CTGCCGAAGC CTCGACCGCG GGAACGCGGC CAGTGAGGAG
ATCCGTGCCG CCGTGGCCGA TCCGTCGCTT TCGGTCATGG AACTCGATTT GGCCGATCTG
GATTCGGTGC GGTCATTCGC TGAGACGTTT CGAACGGAGT ATTCGGATCT GCACGTCCTG
TCTAACAACG CCGGCGTGAT GGCGATCCCA CGGAGCGAGA CCGAGGACGG ATTTGAGACG
CAGTTCGGCG TCAACCACCT CGGCCACTTC GCGCTCACGG GCCTCCTTCT CGACCGCCTT
CGGGAGACTG CAGGCGAGAC GCGGATCGTC ACGCAGAGCA GTGGCCTCCA CGAACGTGGG
GAGATCGACT TCGCTGACCT TCACGGCGAA CAATCCTACG ACCGGTTCGA CGCCTACGCC
CAGTCGAAAC TCGCGAACGT GCTGTTCGCC TACGAACTCG ACCGGCGACT CCGGGCGGCA
AATGCGGAGG TCACGAGCGT CGCTTGCCAT CCTGGGTTCG CCGCGACGAA CCTCCAGCGT
CGGGGTCCCG AACTCGCTGG GTCGAAACTC CGGCTGTGGA TGATGAAGCT CGCGAATGCG
GTGTTCGCCC AGTCCGCAGC CACGGGAGCA CTCCCGATGC TGATGGCTGG GACCGACGCC
GACGTCGCTG GCGGGGAATA CGTCGGCCCG GGCGGGTTGA TGAACATGCG CGGTGCTCCC
GTGATCCAAC GATCAAGTGA CCGATCGTAC GACGACGAAC TTGCCAGGCA ACTCTGGGAC
GTCTCGGTCG ATCTCACTGG GGTTTCATAC GATTTGCCAG ATCCCCAGGC ACCGGATGCT
ACGTCTGCGA ACTGA
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| Protein sequence | MMSSETWGPE AMGDQSEKTV VVTGANSGIG FEVTKAFAEN GARVVMACRS LDRGNAASEE
IRAAVADPSL SVMELDLADL DSVRSFAETF RTEYSDLHVL SNNAGVMAIP RSETEDGFET
QFGVNHLGHF ALTGLLLDRL RETAGETRIV TQSSGLHERG EIDFADLHGE QSYDRFDAYA
QSKLANVLFA YELDRRLRAA NAEVTSVACH PGFAATNLQR RGPELAGSKL RLWMMKLANA
VFAQSAATGA LPMLMAGTDA DVAGGEYVGP GGLMNMRGAP VIQRSSDRSY DDELARQLWD
VSVDLTGVSY DLPDPQAPDA TSAN
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