| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2978 |
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| Symbol | |
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| ID | 8385287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 3066922 |
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| End bp | 3067635 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644974056 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003131872 |
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| Protein GI | 257054039 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.233429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCA GTTTCGATTT CAGTGACCAC GTCGTGCTAG TGACCGGTGC AGGCGGTGCG
CTCGGGAGTG CAACGGCCGA GGCATTCCTC GACGCGGGCG CAACCGTGTG TGCCGCGGAC
GTGATCGCCC CGTCCGCTGA TGGCTATCTG CTTGCCGCTG AGCAGGAAGG TCTCCAGACC
TACCAGGCTG ATTTCACCGA CGAGCCAGCC GTCCAGGCGC TCGTCGAAAC GATCCTCGCC
GATCATGGGC GGCTAGACGC GCTGGTGTGC GTCGCGGGGA CCTGGCAAGG GGGCAATCCT
GTCGACAAAA CCGGGACTGA CACGTTCGAT GTTCTCGTCG ATGTGAACCT CCGAACGGCG
TTTCTCGCCA CGAAACACGC CCTCCCACAC CTGCGGGAAA CGGGGGGTTC AATCGTCACC
GTTTCCTCGA AGTCCTCACT CGAAGGCGGG AGCGGTGACG CCCTCTACCG TGCCTCGAAG
GCCGGTGTTC GATTGCTCAC CGAATCGATC GCTGTCGAGA ACGAAGGGAC GGTCAGGGCG
AACGCCATCC TTCCGGACGT GATCGATACA CCGGCGAATC GCGACATGAT GCCGGATGCG
AATCACGACG AATGGGTCGA TCCCGCCGAC ATCGCCGACG TGATTCAGTT CCTCTGCAGC
GAGGCAGCGG CCCCGGTCAA CGGTGGATCG ATCCCCGTCT CTGGCCAGAC CTGA
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| Protein sequence | MAISFDFSDH VVLVTGAGGA LGSATAEAFL DAGATVCAAD VIAPSADGYL LAAEQEGLQT
YQADFTDEPA VQALVETILA DHGRLDALVC VAGTWQGGNP VDKTGTDTFD VLVDVNLRTA
FLATKHALPH LRETGGSIVT VSSKSSLEGG SGDALYRASK AGVRLLTESI AVENEGTVRA
NAILPDVIDT PANRDMMPDA NHDEWVDPAD IADVIQFLCS EAAAPVNGGS IPVSGQT
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