Gene Huta_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2934 
Symbol 
ID8385243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp3021635 
End bp3022654 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID644974012 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_003131828 
Protein GI257053995 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAA TCACTTTCAC CCCGTCGGGA TTCGGCCAGG GCATGTCCGA CGGGACAATG 
CCGACTGGCT TCGAGGCAAA ACGCGAGGCG TCCGACACGC TGGACACCAT CTGGATGGAC
GGGGAGTTCA TACCGTGGGA AGACGCGACG ATTCACGTGC TTTCCCACGC GCTCCATTAC
GGGACGAGCG TCTTCGAGGG CGTCCGGTGT TACGAGACAG CCGACGGTCC GGCACTGTTC
CGGTGGGATG CCCACCTGGA CCGGCTCTAC AACTCGGCTG CCATGTACGA TCTGGACATC
GGCTTCGACC GCGAAGAGCT GACGACGGCA ACGCTGGAAC TTCTGGCACG CCAGGACCTC
GGGGGCTGTT ACGTCCGGCC GATCGCCTTC TACGGCTACG ACCGACTTGG GGTGAGTCCG
ACGACGCCGA CGAAACTCCC CGAGCGTGTC GCGATTGCCG CCTGGCCGTG GGAATCATAC
CTGGGAGAAT CGGCCCTGGA AGACGGGATC GACGCCGGTG TCTCCTCGTG GCGAAAGTAC
GGCCACGACC AGATCCCGCC GACGGCAAAG ACCACCGGTG CGTACGTCAA CGGCGTGCTC
GCGACCGACG AAGCGGCCCG CAACGGCTAC GACGAGGCGA TCGTGCTCAA CAGCGAGGGT
AACGTCGCCG AGGGACCGGG CGAAAATCTC TTTCTCGTCG ATGACGGGGA GATCTACACA
CCCGGCCTCG CCGAGGATGC ACTCGATGGC ATCACACGCC AAAGCGTCAT CGAACTCGCT
CGCGAGGCGG GATACACCGT CCACGACGAC GCCCGGATCG GCCGCGGCGA GCTCTATACG
GCGGACGAAC TGTTCTTCAC CGGGACGGCC GCCGAGGTGA CGCCGATCCG GTCGGTCGAC
GACCGCGCGA TCGGCGCGGG ATCGAAAGGG CCGGTGACCG ACGACTTGCA AACGCGGTTT
TTCGATCTCG TGTCGGGACC GGTCGACACC CACGAGGCGT GGTTCACGCG CGTGCACTGA
 
Protein sequence
MAEITFTPSG FGQGMSDGTM PTGFEAKREA SDTLDTIWMD GEFIPWEDAT IHVLSHALHY 
GTSVFEGVRC YETADGPALF RWDAHLDRLY NSAAMYDLDI GFDREELTTA TLELLARQDL
GGCYVRPIAF YGYDRLGVSP TTPTKLPERV AIAAWPWESY LGESALEDGI DAGVSSWRKY
GHDQIPPTAK TTGAYVNGVL ATDEAARNGY DEAIVLNSEG NVAEGPGENL FLVDDGEIYT
PGLAEDALDG ITRQSVIELA REAGYTVHDD ARIGRGELYT ADELFFTGTA AEVTPIRSVD
DRAIGAGSKG PVTDDLQTRF FDLVSGPVDT HEAWFTRVH