| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2928 |
|---|
| Symbol | |
|---|
| ID | 8385237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 3013682 |
|---|
| End bp | 3015805 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644974006 |
|---|
| Product | Fibronectin-binding A domain protein |
|---|
| Protein accession | YP_003131822 |
|---|
| Protein GI | 257053989 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.256902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCA AGCGGGAACT CACCAGCGTG GACTGTGCCG CACTCGCCGG GGAACTCCGG
GCGTTCGTCG GCGCGTACCA CGAGAAATCC TATCTCTACG ACGACGATCT GCTTCGCCTC
AAGCTGAGCG GCCCGAACTT CGGCCGGATC GAACTCCTGA TCGAGGTCGA CGACCCCAAG
CGCGTGCACA CGATCACTCC GGATCGGGTT CCCAACGCGC CCGAGCGGCC GCCCAATTTC
GCGATGATGC TCCGGAACCG GCTGGAAGGA GCACAACTCG AGAGCGTCGA GCAGTTCGAG
TTCGACCGCA TCCTCCAGTT GCGCTTCGAA CGCAGCGACG ACCACACGAC GATCATCGCC
GAGCTATTCG GCGATGGCAA CCTCGCCGTG CTCGACGAGA CAGACACCGT CATCGATTCC
CTGGAGACGG TGCGCCTGCA ATCCAGAACG GTCACGCCGG GCTCTCAATA CGAGTTTCCG
TCAGCGCGAT TCAACCCGCT CACCGTCGAG TACGAGACGT TCGTCGAGCG GATGCGACAG
TCAGACGCAG ACGTGGTGCG GACGCTGGCG ACCCAGCTCA ACTTCGGCGG GCTCTACGGC
GAGGAACTCT GCTCGCGGGC CGGCGTTCCC TACAACCAGG CCATCGGGGA GACCACCGAC
GCGGAGTTCG AGGCGCTGTA CGACGCAGTG AATGACCTCT CGACACGACT CCGCGAGGGC
GATCTCGACC CGCGACTCTA CTTCGAGACG GACGAGCAGG AGACGCCCGT CGACGTGACG
CCGGTGCCGC TGGTCGAGTA CGAAGACACG CCAGGCGAGT CCTTCGACTC GTTCAACGAC
GCCCTCGAAG CGTACTTCCT CGGTCTGGAA CAGGAGCCCG ACGAGGAGGA AACCGGATCG
AATCGACCGG ACTTCGAGGC GGAGATCGAG AAACAAAAGC GGATTATCCA ACAGCAGGAA
GGGGCCATCG AAGACTTCGA GGAAGACGCC GAGGCCGAAC GCGAGAAAGC CGAACTCCTC
TATGCGAACT ACGACCTCGT CGACGAGGTG CTTTCGACGG TCCAGGACGC CAGAGCGGCC
GAAACACCCT GGGACGAGAT CGAGGCGACG CTTTCGGCTG GCAAGGACCA GGGGATCCCG
GCCGCCGAGG CCGTCCGCGA TGTCGACGGC AGCGAGGGGA CGGTGACGGT GCAGATCGAC
GACCACCACA TCGAACTCGA CGCCGATACC GGCGTCGAGA AGAACGCTGA CCGCCTCTAT
CAGGAGGCAA AGCGCATCGA GGGGAAGAAG GCCGGCGCGG AGGAGGCGAT CGCGAACACC
CGTGAGCAAC TCGAAGCCGT CAAACAACGG CGTGAGGCGT GGGAAGCCAG CGACGGGGAC
GATGGCGGTG ACGGGAGCGG AGAAACCCAC GAGGACGACC AGGAAGACGT CGACTGGCTG
ACTCGCGAAT CGATCCCGAT CCGGACGAGC GAGGAGTGGT ACGAACGGTT CCGGTGGTTT
ACGACGAGCG ATGGCTTTCT CGTGATCGGC GGCCGAAACG CCGACCAGAA CGAGGAACTC
GTCAAGAAGT ATCTCGATCG CGGCGATCTG TTCTTCCACA CGCAGGCCCA CGGCGCGCCG
GCGACGATCC TGAAAGCGAC CGGGCCGAGC GAAGCGCCAC CGGACGACAT CTCGATTCCG
GAGTCGAGTC GGGAGGAGGC CGCCCAGTTC GCCATCTCCT ACTCGACGCT CTGGAAGGAG
GGAAAATATG CGGGAGACGT CTACTGCGTC GGCCCCGACC AGGTCACCAA GACGCCCGAG
AGCGGCGAGT ATCTGGAGAA GGGGAGCTTC GCCATCCGGG GCGATCGGAC CTACTACGAC
GACACGCCGG TCGGCGTCGC CGTCGGAATC ACCTGCGAAC CTGAGACGCG CGTCATCGGC
GGCCCGCCGA GCGCAATCGA CGGGCAGGCC GAGACCACGA TCGAAGTCGA ACCGGGGCGG
TATGCACAGA ACGACATCGC CAAGCGACTG TACCGGGAAT TCAAGGGGCG CTTCGCTGAC
GATACCTTCG TCCGGAAGGT CGCCAGTCCG GATTTGATCC AGGAGTTCCT CCCGGCGGGT
GGCAGCCGGA TGGTCGAGGA GTGA
|
|---|
| Protein sequence | MDRKRELTSV DCAALAGELR AFVGAYHEKS YLYDDDLLRL KLSGPNFGRI ELLIEVDDPK
RVHTITPDRV PNAPERPPNF AMMLRNRLEG AQLESVEQFE FDRILQLRFE RSDDHTTIIA
ELFGDGNLAV LDETDTVIDS LETVRLQSRT VTPGSQYEFP SARFNPLTVE YETFVERMRQ
SDADVVRTLA TQLNFGGLYG EELCSRAGVP YNQAIGETTD AEFEALYDAV NDLSTRLREG
DLDPRLYFET DEQETPVDVT PVPLVEYEDT PGESFDSFND ALEAYFLGLE QEPDEEETGS
NRPDFEAEIE KQKRIIQQQE GAIEDFEEDA EAEREKAELL YANYDLVDEV LSTVQDARAA
ETPWDEIEAT LSAGKDQGIP AAEAVRDVDG SEGTVTVQID DHHIELDADT GVEKNADRLY
QEAKRIEGKK AGAEEAIANT REQLEAVKQR REAWEASDGD DGGDGSGETH EDDQEDVDWL
TRESIPIRTS EEWYERFRWF TTSDGFLVIG GRNADQNEEL VKKYLDRGDL FFHTQAHGAP
ATILKATGPS EAPPDDISIP ESSREEAAQF AISYSTLWKE GKYAGDVYCV GPDQVTKTPE
SGEYLEKGSF AIRGDRTYYD DTPVGVAVGI TCEPETRVIG GPPSAIDGQA ETTIEVEPGR
YAQNDIAKRL YREFKGRFAD DTFVRKVASP DLIQEFLPAG GSRMVEE
|
|---|
| |