| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2859 |
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| Symbol | |
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| ID | 8385168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2932650 |
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| End bp | 2935193 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644973937 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003131753 |
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| Protein GI | 257053920 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTG ATGACAAAGA TGGTGGGGAC GGATCACTTC GTTCACGGGC CACCTCGCTG
TTTGGGGACA GCGACGACGA GCAACCTGCC GAAGCGGAGG AGGAAGATGC CTACAACTGG
GTGGACTTTC GGCGGGAGTT CCACGACGGG GGTGCCTTCG ATCGGAGCGA ATACCTCGGC
TTCGACCCAC ATCGGACTGC GGCGGTACTC AGAGAGCGCG CGAGTGATGC GGAGACGTTA
AACACACACT GGCAGGCCTT CGCCGACCCC GAGACCACAC CGGTTCGCAA GGGGGAGTAT
TACTGGGAAC ACTTCAAACG GGAGTACTAT TACGAGTCCG ACGGGTCCGT CCCGCACGAC
GACGCGGGCG AGAAGATCCC GTTCGAGGAA AGCGACCATC TCGGGTTCGA GCCGGACGAG
CTAGCGGGGC GGATGAGCCA CGGCCAGAAC CTGGCCGAGG AACTCGTCGA CCTCGTCGAC
GAACGGACGG TCGACGTCAA CGAGGAGTTA GACGAGGACG CCTTCTTCTC GACGGTCGAG
GGCAACACGA CGGTCGTCAA TCGCTACGAC CTCGAACGGG CCGTCCCGAT GGAGAAAAAG
CGCCACTTCG AGGAAGTCGA GCGCTACTGG GTCAACAAAC CCTACGCCTG TGTCGTGCTC
TTTCACTCGA AAAAGGAGAA CGAGCGCAAG TACTACGTCA TCGAGCCCGC GCTCAACGAC
ATCGAGCGCG AACTCAAGGG GTTCCTGGGC AACAAACTCA AGACGGCGAT CAAGTACGCC
GAGGAGGGTG TCGGCGTCGA AGACGGGGAA GCCGACCGGG CCGCAGTCAT CGAACGCGAG
GCTCAGGATC TCCTCAAGCG ATACGATATC TACGAGGACG CCATCGAGTC GGGGGCGGGA
ACGGGGTCGA CCGACTGGCT CAAGGAGCTG GTGGGCATGG ACACCGAGAC GGATGCGATC
GAGCCGGCAG AGGAGTCCTC GGCGCTTGCG GGCATCGCGG CGCGGCCGGA ACCCGCGATC
ATCGAGGAGG ACCCCGACAC GCTCACCGAA TATCAGGTCG AGAAACTCCT GTACCTGCTC
AAACGGGACT ACATCGGCTA CGGCAAGATC GACCCGATCA AACACGACAT CAACGTCGAG
GACGTTTCGT GTGACGGGTA CAACTCCCGG GTGTTCGTCT ATCACACCGA CTACGAGCAG
ATCATCTCCA ACGTCGAGCA CGGCGAGTCC GACCTCGACG ACTTCGTGGT GAAACTCGCC
CAACGATCCG GAAAGGGCAT CTCCAAGCGC CAGCCGCAAG TCGACGCCAC CCTGCCGGAC
GGGTCGCGTG CCCAACTCAC CCTCGGTCGG GAGGTCTCCG ATCACGGGAC CAACTACACC
ATCCGGCAGT TCAAGGACGT CCCGTTCACG CCGGTGGACC TGATCAACTG GAACACGTTC
TCGTTGGACG AGATGGCGTT CCTCTGGCTC GCGATCGAGA ACAACAAGTC GATGATCTTC
GCCGGCGGGA CGGCATCCGG GAAGACGACC TCGCTGAACG CGATCTCGCT TTTCATCCCC
AGCAACGCCA AGATCGTCTC CATCGAGGAC ACGCGCGAGG TCGAACTCCC CCAGCGCAAC
TGGGTTGCGT CGGTGACTCG CCCCTCTTTC GGGGAGGACC AGACGGGAGA CATCGACGAG
TTCGACCTGC TGGAAGCGGC ACTCCGCCAG CGGCCGGACT ACATCGTCAT GGGCGAGGTC
CGTGGCGAGG AAGGGCGTGA CCTCTTCCAG GTCATGTCGA CCGGTCACAC CGGGTACTCG
ACGTTCCACG CCGACACGGT CGGTGAGGTC ATCAAACGGT TCACGACCGA CCCGATCAAC
GTCTCGAAGA CGCTCTTTAC GGCGCTGGAT CTCGTCTCGA TCCAGACCCA GACCCGGGTG
CAGGGCCGGA AAGTCCGCCG GAACAAGACC CTGACCGAGA TCAACGAGTA CTCCCCGGAG
AACGACGAGA TCAACGTCAG GGACGTCTAC CAGTGGCAGG CCGAGTCCGA CGAGTTCCTC
CAGATGGGGT CTTCGAGCAC CTTAGAGGAG ATCAAATTCG ACCGCGGGTG GGATCAGGAC
ACCCTCGACG AGGAACTGTT CATGCGAAAG GTCGTCCTTG CGTACCTCAT CGAGCAGGGC
CTGAACACCT ACACCGAAGT GGCGGCGACG CTACAGGCGT TCATCAACGA TCCGAAGACG
ATCATGACGC TGATCGCTAA CGATCAACTC GATCACAGCC TGGAGGACCT CCGGGAAATG
GAATCCGTCC AGATCACGGT CGACCCGGCA AAGGAGGAGA TGGTCCCACG ACCGGATCCG
CCGGACGAGC TCTTGAGTGA GGCGACGGAC GTCCTCGAGA ACGCGACGCC GTTGTTTGAC
CGATACAAAG AACAGGCACG GACGGACATC GTGAGCGCGC TGGCCGACGT CGAAAGTGAC
GACGCGCTCG CTGAGGACGA TGACGACGTT GACTTCGGTC GGTTCGTACC GAAAGCAGGG
ACTGACGGGG TCGAGGGAGA ATGA
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| Protein sequence | MAIDDKDGGD GSLRSRATSL FGDSDDEQPA EAEEEDAYNW VDFRREFHDG GAFDRSEYLG
FDPHRTAAVL RERASDAETL NTHWQAFADP ETTPVRKGEY YWEHFKREYY YESDGSVPHD
DAGEKIPFEE SDHLGFEPDE LAGRMSHGQN LAEELVDLVD ERTVDVNEEL DEDAFFSTVE
GNTTVVNRYD LERAVPMEKK RHFEEVERYW VNKPYACVVL FHSKKENERK YYVIEPALND
IERELKGFLG NKLKTAIKYA EEGVGVEDGE ADRAAVIERE AQDLLKRYDI YEDAIESGAG
TGSTDWLKEL VGMDTETDAI EPAEESSALA GIAARPEPAI IEEDPDTLTE YQVEKLLYLL
KRDYIGYGKI DPIKHDINVE DVSCDGYNSR VFVYHTDYEQ IISNVEHGES DLDDFVVKLA
QRSGKGISKR QPQVDATLPD GSRAQLTLGR EVSDHGTNYT IRQFKDVPFT PVDLINWNTF
SLDEMAFLWL AIENNKSMIF AGGTASGKTT SLNAISLFIP SNAKIVSIED TREVELPQRN
WVASVTRPSF GEDQTGDIDE FDLLEAALRQ RPDYIVMGEV RGEEGRDLFQ VMSTGHTGYS
TFHADTVGEV IKRFTTDPIN VSKTLFTALD LVSIQTQTRV QGRKVRRNKT LTEINEYSPE
NDEINVRDVY QWQAESDEFL QMGSSSTLEE IKFDRGWDQD TLDEELFMRK VVLAYLIEQG
LNTYTEVAAT LQAFINDPKT IMTLIANDQL DHSLEDLREM ESVQITVDPA KEEMVPRPDP
PDELLSEATD VLENATPLFD RYKEQARTDI VSALADVESD DALAEDDDDV DFGRFVPKAG
TDGVEGE
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