| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2858 |
|---|
| Symbol | |
|---|
| ID | 8385167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2931396 |
|---|
| End bp | 2932541 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644973936 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_003131752 |
|---|
| Protein GI | 257053919 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.961149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG AGCTATCCGA GCGGGCCCGG ACCATCCCAC CGTCGGGTAT CCGGCGGTTC
TTCGAACTCG CCGAGCAGCA GGACGACATC ATCTCCCTGG GCGTGGGCGA ACCGGACTTC
TCCGCGCCCT GGAGTGCACG GGAAGCGGCC ATCGCCTCCC TGGAACAGGG CAAGACCTCC
TACACGGCCA ATCGGGGCAA ACTCGAACTC CGGGAGGCGA TCGCGGGCCA CGTCGCTGAT
GCGTTCGACC TCACGTACGA TCCCGACGAC GAGATCCTGG TGACGACGGG CGTTAGCGAG
GCCGTCGATC TGGCCCTGCG GGCGATCGTC GATCCCGGCG ACACCGTCGC CGTGGCCAAG
CCCGCCTATA TCTCCTACGT CCCGGGCGCG ATCTTCGCCG GCGGCGACCC CCTCGACGTG
GTGACCCGGC GGGACGACGA GTTCAAACTC ACTCGGGAGG TGCTCGAAGC CAGCGGGGCG
GCCGAGGCCG ACGTGCTCGT GATGAACTAC CCGAACAACC CCACGGGCGC GACGATGAAC
CGGGCGGAAC TCCAGCCGGT CGCCGAATTC GCGCGCGAGC ACGATCTCAC GGTCCTGAGC
GACGAGGTGT ACGCCCAACT GAGCTACGAA CACGACCACA CCTCGATCGC AACGCTGCCG
GGCATGCGCG AGCGGACCAT CGTCTTCAAC GGCTTCTCGA AGGCCTACGC GATGACGGGC
CTTCGGCTGG GGTACGCGAT GGGGCCGCCG GACGTGATCG CCGCGATGAA CCGGATCCAC
CAGTACACGA TGTTGTCGGC CCCGACCACG CCCCAGTATG CGGCCATCGA GGCGCTTGAA
CGCTGTGAGG ACGACGTCGC CGAGATGCGC AACCAGTACA ACCGGCGACG CCGGTTCGTC
CTCTCCCGGT TCGAGGAGAT GGGCGTCGAC TGCTTCCCCG CGAGCGGTGC CTTCTATGCC
TTCCCGGAAT CGCCCTGGGA TGACAGTGAC GCCTTCGCCG AAGCACTCCT CGAAGAAGCA
GGCGTCGCGG TCGTCCCGGG TAACGTCTTC GGCGATGCCG GCGAGGGCCA CCTTCGCGTC
TCGTACGCGA CAGGGCTTGG CGACCTCAAG GAAGCACTGG CTCGCTTCGA GGAATTTATT
TCGTAA
|
|---|
| Protein sequence | MTIELSERAR TIPPSGIRRF FELAEQQDDI ISLGVGEPDF SAPWSAREAA IASLEQGKTS
YTANRGKLEL REAIAGHVAD AFDLTYDPDD EILVTTGVSE AVDLALRAIV DPGDTVAVAK
PAYISYVPGA IFAGGDPLDV VTRRDDEFKL TREVLEASGA AEADVLVMNY PNNPTGATMN
RAELQPVAEF AREHDLTVLS DEVYAQLSYE HDHTSIATLP GMRERTIVFN GFSKAYAMTG
LRLGYAMGPP DVIAAMNRIH QYTMLSAPTT PQYAAIEALE RCEDDVAEMR NQYNRRRRFV
LSRFEEMGVD CFPASGAFYA FPESPWDDSD AFAEALLEEA GVAVVPGNVF GDAGEGHLRV
SYATGLGDLK EALARFEEFI S
|
|---|
| |