| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2757 |
|---|
| Symbol | |
|---|
| ID | 8385063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 2828024 |
|---|
| End bp | 2830159 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644973832 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_003131651 |
|---|
| Protein GI | 257053818 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.89613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAA GGAGTACTCA AGACTGGTGG CCAAACCAGT TGGATCTGAC AATTCTCGAC
CAGAACGCTC GCGACGTCAG TCCGTATGAC GCGGACTACG ACTACGCCGA AGCGTTCGAA
GAACTCGATC TCGAAGCGGT CAAGGAAGAT CTCGAAGAGC TGATGACCGA TTCGAAGGAC
TGGTGGCCGG CCGATTACGG CCATTATGGT CCCCTCTTCA TCCGGATGGC CTGGCACAGT
GCCGGCACGT ACCGCACCAC GGACGGCCGT GGTGGGGCCG CGGGCGGCAG ACAGCGGTTC
CCGCCGCTTG ACAGCTGGCC GGACAACGCG AACCTGGATA AGGCACGGCG ACTGCTCTGG
CCGATCAAGC AAAAGTACGG CCGGAAGCTC TCGTGGGCTG ACCTGATCGT TCTGGCCGGC
AACGTCGCCA TGGAGTCGAT GGGCTTCGAG ACGTTCGGCT TCGCCGGCGG CCGCGAGGAC
GACTTCGCCC CCGACGAGTC GGTCGACTGG GGGCCGGAAA TGGAGATGGA GTCCTCCGAA
CGCTTCGAGG ACGGCGAACT CGAGAACCCC CTCGGCGCGA CCGTCATGGG CCTCATCTAC
GTGAACCCGG AAGGCCCGGA CGGCGAACCG GCCCCGGAAG CCTCGGCGGA GAACATCCGG
GAGTCCTTCA GCCGGATGGC GATGAACGAC GAGGAGACGG TCGCGCTCAT CGCCGGCGGC
CACACGTTCG GGAAAGTCCA CGGTGCCGAC TCCGGTGACC ACCTCGGTCC CGAGCCCGCG
GATGCCCCAA TCGAGGAACA GGGCCTCGGC TGGGACAATG AGTACGGCTC GGGCAAGGGC
GCGGACACTA TCACCAGCGG AATCGAGGGG CCCTGGAACA CCACGCCGAC CGAGTGGGAC
ATGGGCTACA TCGACAACCT TCTCGAGTAC CAGTGGTGGC CCGAGAAGGG CCCCGGCGGC
GCGTGGCAGT GGACCACCCA GAACGGCGAA CTCGACGAGT CCGCCCCCGG CGTCGAGGAC
CCCGACGACA AGGAGGACGT GATGATGCTC ACGACCGACA TCGCGCTGAA GCGCGATCCG
GATTACCGGG AGATCCTCGA ACGCTACCAG GACAACATGA TGGAGTTCGG GATCAACTTC
GCGAAGGCGT GGTACAAGCT GATCCACCGC GACATGGGTC CGCCCGAGCG TTTCCTCGGT
CCGGAAGTAC CCGACGAGAC CATGATCTGG CAGGATCCCC TGCCGGACGC CGACTACGAT
CTGGTCGGCG ACAGCGAGGT CGCGGATCTC AAGGGGACGA TCCTCGACTC GGATCTCTCC
CGCTCCCAGC TGGTCAAGAC CGCCTGGGCC GCTGCCTCGA CGTACCGCGA CAGCGACAAG
CGGGGCGGTG CCAACGGTGC TCGGATCCGA CTGGAACCCC AGAAGAGCTG GGCGGTCAAC
GAGCCCGACG AGCTGGAGAC GGTCCTCTCG ACGTACGAGG ACATCCAGGC CGAGTTCAAC
GACTCCCGGT CCGACGACGT CCGTGTCTCG CTCGCGGACC TGATCGTCCT CGGTGGGAAC
GCGGCCATCG AGGAGGCCGC TGCGGACGCC GGCTACGACG TGACGGTGCC CTTCGAGCCC
GGCCGAACCG ACGCCGAGCC CGAACAGACT GACGTCGAGT CCTTCGAGGC GCTGAAGCCC
GAAGCCGACG GCTTCCGCAA TTACGTCGGC GAAGAGGCCG ACCGCAAGCC CGAAGAGATC
CTGGTGGACA ACGCCGAGTT GTTGAACCTG ACCGTCCCCG AGATGACGGT CCTCCTCGGC
GGCATGCGCC AGTTGGGCGC GACCTACGGC GACACCGAGA AGGGCGTTTT CACCGATCAG
CCCGGCACGC TCACGAATGA CTTCTTCGTG AACGTCCTCG ACATGGACTA CGAGTGGGAA
GGGACCGACG ACGAGAACGT CTACGAGATC CGTGACCGCG AGACGGGTGC GGTCGAGTGG
ACAGGCTCGC GTGTCGATCT CATTTTCGGG TCGAACGCCC GACTTCGTGC CGTCTCGCAG
GCGTACGCCG CCGAGGACGG CGAGGAGCAG TTCGTCTCGG ACTTCGTCGA CACCTGGAGC
AAGGTCATGC AGCTTGACCG CTTCGATCTC GAATAA
|
|---|
| Protein sequence | MMRRSTQDWW PNQLDLTILD QNARDVSPYD ADYDYAEAFE ELDLEAVKED LEELMTDSKD
WWPADYGHYG PLFIRMAWHS AGTYRTTDGR GGAAGGRQRF PPLDSWPDNA NLDKARRLLW
PIKQKYGRKL SWADLIVLAG NVAMESMGFE TFGFAGGRED DFAPDESVDW GPEMEMESSE
RFEDGELENP LGATVMGLIY VNPEGPDGEP APEASAENIR ESFSRMAMND EETVALIAGG
HTFGKVHGAD SGDHLGPEPA DAPIEEQGLG WDNEYGSGKG ADTITSGIEG PWNTTPTEWD
MGYIDNLLEY QWWPEKGPGG AWQWTTQNGE LDESAPGVED PDDKEDVMML TTDIALKRDP
DYREILERYQ DNMMEFGINF AKAWYKLIHR DMGPPERFLG PEVPDETMIW QDPLPDADYD
LVGDSEVADL KGTILDSDLS RSQLVKTAWA AASTYRDSDK RGGANGARIR LEPQKSWAVN
EPDELETVLS TYEDIQAEFN DSRSDDVRVS LADLIVLGGN AAIEEAAADA GYDVTVPFEP
GRTDAEPEQT DVESFEALKP EADGFRNYVG EEADRKPEEI LVDNAELLNL TVPEMTVLLG
GMRQLGATYG DTEKGVFTDQ PGTLTNDFFV NVLDMDYEWE GTDDENVYEI RDRETGAVEW
TGSRVDLIFG SNARLRAVSQ AYAAEDGEEQ FVSDFVDTWS KVMQLDRFDL E
|
|---|
| |