| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2731 |
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| Symbol | |
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| ID | 8385036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 2799069 |
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| End bp | 2801603 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644973805 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003131625 |
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| Protein GI | 257053792 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.186723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCTGA TCGTCACCGA GAAGGACAAC GCCGCCAGGC GGATCGCCGA GATCCTCAGC
GACGACTCGG CGAGTGGTGA GCGGCGAAAT GGCGTCAACG TCTACAAGTG GGGCGGCCAG
CGCGTCGTCG GCCTCTCCGG ACACGTCGTC GGCGTCGACT TCCCGCCGGA ATACGCCGAG
TGGCGCGACG TCGAACCGGC CGAGTTGATC GACGCCGATG TCGTTACAAC GCCCACGCGG
GAGAACATCG TCGCGACACT CCGTAGCCTC GCCAGAAAGG CCGACGAGGT CGTGATCGCG
ACCGACTACG ACCGCGAGGG CGAACTCATC GGGAAGGAAG CCTACGAGTT GATCCGCGAG
GAAACCGACG CGCCGGTAGA GCGCGTTCGC TTCTCCTCGA TTACCGAACG AGAAGTCCAG
AAGGCCTTCG AGAATCCCGA CGAGATCGAC TTCGACCTCG CCGCCGCAGG CGAAGCCCGC
CAGATCGTCG ACCTGATCTG GGGCGCGGCA CTGACCCGCT TCCTCTCGCT GTCTGCCAAA
CAGCTCGGCA ACGACTTCAT CTCTGTCGGC CGTGTCCAGA GCCCGACACT GAAGCTGATC
GTCGACCGCG AACGCGAGAT CGAGGCCTTC GATCCCGACG ACTACTGGGA GATCCTCGCC
GACCTCGCGA AGGACGGCCA GGGCTTCGAG GCCCAGTACT TCTACGACGA CGACGGCAGC
GAAGCCGAGC GGGTCTGGGA CGAAGCGGCC GCCGAAGCTG CCTACGCGGA TCTCTCCGAA
TCCGGGACGG CCACCGTCAC CGAAGTTCGG CGGCGAACGC GTACCGACGA CCCGCCCGCG
CCGTTCAACA CGACCGCGTT CATCTCCGCG GCGAGTTCGC TCGGCTACTC CGCCCAGCGC
GCCATGTCGC TGGCCGAGGA ACTCTACACG GACGGCTACC TGACCTACCC ACGGACGGAC
AACACCGTCT ATCCCGACGA TCTCGATCCC GAAGAGCTGT TGGGTGCCTT CGAAGGCAGT
TACGAGTTCG GCGACGACGC GGCGTCGTTG CTCGATCAGG ACGAAATCGA GCCGACCCGT
GGCGAGACCG AATCGACCGA CCACCCGCCG ATCCATCCGA CCGGCGAACT GCCGGATCGC
GACGAGGTCG GCGCGGACGC CTGGGAGATC TACGAGCTCG TCGTCCGGCG GTTCTTCGCG
ACCGTGGCCG AGCCGGCGAC CTGGGCGCAC CTGCGGGTCG TCGCCGAGGC GGCGGGCCGG
TCGCTGAAGG CCAACGGCAA GCGCCTGCTC GAGGAGGGGT ACCACGCGGT CTATCCCTAC
TCCTCCGCCG GCGAAACGTT CGTTCCCGAG GTCAGCGAGG GCGACAAGCT CTCGATCGAC
GCGGTCGAAC TGGAGGCCAA ACAGACCCAG CCGCCGCGCC GCTACGGCCA GTCGCGGCTC
ATCCAGCATA TGGAGGAGAT GGGCATCGGG ACGAAAGCGA CCCGGCACAA CATCGTCGAG
AAACTCTACG ATCGCGGGTA CGTCGAGGAC GATCCACCGC GGCCGACCAA ACTCGCCGAG
GCAGTGGTTT CCGCCGCCGA GGAGTACGCC GATCACGTCG TCAGCGAGGA GATGACCGCC
CAGCTGGAGG CCGACATGAC CGCCATCGCC GAGGGGGAGG CGACCTTGGA AGAGGTGACC
GCGGAATCCC GGGAGATGCT CGGCGAGATC TTCGAGGAAC TACGCGAGTC CCGCACGGAG
ATCGGCGAGT TCCTCCAGGA GTCGCTGAAG GCCGACCGAA CGCTCGGGCC CTGTCCGGAG
TGTGGCGAGG ATCTGCTGGT TCGCCGGAGT CGCCAGGGAT CGTACTTCGT CGGGTGTGAC
GGCTTCCCAG AGTGTCGGTT CACCCTTCCA CTGCCGAGCA CGGGCGAACC ACAGGTGACC
GACGAAACTT GCGAGGATCA CGATCTTCGG CACGTCAAGA TGCTCGCGGG CCGGGACACG
TTCGTCCACG GCTGTCCGCG GTGCAAAGCG GAGGCAGCCG ACGAGAGCGA GGACGAGGTG
ATCGGGCACT GTCCCGAATG TGGAGATAGC GCTGCGCCGG AGGGACAGCG AAACGAAGGC
GGCGAAGCCG CCGAAGGGGA GGGCGGCAAG CTCGCGATCA AACACCTTCG CTCGGGTTCG
CGACTAGTCG GCTGTACGCG CTATCCGGAC TGTGATTACT CGCTCCCGCT CCCCCGTCGT
GGTGAGATCG TCGTGACCGA CGAGCGTTGC GAGGACCACG ACCTGCCCCA CATCGAAATC
CACGACGGCG ATGACGACGA TCCCTGGGAA CTGGGCTGTC CGATCTGCAA CTACGAGGAG
TTCCAGGCGC GCAACGCCGT CGAAAACTTG GAGGACCTCG ACGGGGTCGG CCCGGCGACG
GCGGAGAAAC TACAGGACGC TGGCGTAGCG GACCCCGAGG ACCTCCACGA GGTGGACCCG
GACGCCGTCG CCGGCGAGGT CCAGGGCGTC AGTGCCGATC GCATCCGGGA ATGGCAAGAC
GAGTTGGCCG CCTGA
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| Protein sequence | MRLIVTEKDN AARRIAEILS DDSASGERRN GVNVYKWGGQ RVVGLSGHVV GVDFPPEYAE
WRDVEPAELI DADVVTTPTR ENIVATLRSL ARKADEVVIA TDYDREGELI GKEAYELIRE
ETDAPVERVR FSSITEREVQ KAFENPDEID FDLAAAGEAR QIVDLIWGAA LTRFLSLSAK
QLGNDFISVG RVQSPTLKLI VDREREIEAF DPDDYWEILA DLAKDGQGFE AQYFYDDDGS
EAERVWDEAA AEAAYADLSE SGTATVTEVR RRTRTDDPPA PFNTTAFISA ASSLGYSAQR
AMSLAEELYT DGYLTYPRTD NTVYPDDLDP EELLGAFEGS YEFGDDAASL LDQDEIEPTR
GETESTDHPP IHPTGELPDR DEVGADAWEI YELVVRRFFA TVAEPATWAH LRVVAEAAGR
SLKANGKRLL EEGYHAVYPY SSAGETFVPE VSEGDKLSID AVELEAKQTQ PPRRYGQSRL
IQHMEEMGIG TKATRHNIVE KLYDRGYVED DPPRPTKLAE AVVSAAEEYA DHVVSEEMTA
QLEADMTAIA EGEATLEEVT AESREMLGEI FEELRESRTE IGEFLQESLK ADRTLGPCPE
CGEDLLVRRS RQGSYFVGCD GFPECRFTLP LPSTGEPQVT DETCEDHDLR HVKMLAGRDT
FVHGCPRCKA EAADESEDEV IGHCPECGDS AAPEGQRNEG GEAAEGEGGK LAIKHLRSGS
RLVGCTRYPD CDYSLPLPRR GEIVVTDERC EDHDLPHIEI HDGDDDDPWE LGCPICNYEE
FQARNAVENL EDLDGVGPAT AEKLQDAGVA DPEDLHEVDP DAVAGEVQGV SADRIREWQD
ELAA
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