Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2698 |
Symbol | |
ID | 8385003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2764721 |
End bp | 2766646 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644973772 |
Product | beta-lactamase domain protein |
Protein accession | YP_003131592 |
Protein GI | 257053759 |
COG category | [R] General function prediction only |
COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.132267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG TAGATCAGCA ACTTGCGGAT ACGAAAGAGA CGATTGTTAG CGAAGTACCC AATGACATTT CGATCACGGA TGTCACCTAC GAGGGGCCGG AACTGGTCAT CTACACGCGC GATCCAAAGT CTTTCGCGGA GAACGGCGAC CTCGTTCGTC GGCTTGCGTC GAAACTCCGC AAACGGATCA CCGTCCGTCC GGACACCGAC GTCCTTTCGC CACCTCGGGA GGCCCGTGAC GAGGTCCACT CGGTCATCCC CGAGGAGGCC AGCGTCACCG ATCTGGACTT CCACGAGGAC ACCGGCGAGG TCGTCATCGA GGCCGAGAAG CCGGGGATGG TGATCGGTCG GCACGGATCG ACGCTCCGGG AGATCACCCA GAAAGTTGGG TGGACGCCGG AGGTCGTCCG GACCCCGCCG ATCGAGTCCT CGACGGTCAG CAACGTCCGG AACTTCCTCA AACAGGAACG CGACGACCGC CGGGACATCC TCGAACGCGT CGGTCGCCAG ATCCACCGCG AGGAGATGTC CGACGACGAG TGGGTCCGGA TTACGACGCT TGGCTGCTGT CGGGAAGTCG GCCGCGCGTC GTTCATTCTT TCGACCCCCG AAACCCGGGT TCTCATCGAC GCCGGTGACA AACCGGGCGC GGAAGACGAG TATCCCTATC TGCAGGTACC CGAGGCCCTC GGTGTCGGCG CGAGTTCGAT CGACGCGGTC GTCCTCACCC ACGCCCACCT CGATCACTCC GCGCTCATCC CGCTGCTGTT CAAATACGGC TACGACGGGC CGATCTACAC GACAGAGCCG ACGCGTGACC TGATGGGGCT GCTCACACTC GATTATCTCG ACGTCGCAGC TAAGGAAGGG CGCGCCCCGC CGTACGACTC CGAGATGGTC CGGGAGGCGA TCAAACACAC CATCCCGATC GAGTACGGCG ACGTGACCGA CATCTCGCCG GACATCAAGC TCACGATGCA CAACGCCGGC CACATCCTCG GTTCGGCGAT CTCACACTTC CACATCGGCG ACGGCCTGTA CAACGTCGCG TTCTCGGGGG ACATCCACTA CGACGACACG CGGCTGTTCA ACGGCGCAGT CAACGAGTTC CCCCGCGTCG AGACGCTCGT TCTGGAGTCG ACCTACGGCG GGCGCAACGA CTACCAGACC GACCAGGCGG ACTCCGAACA AAGGCTCAAG GAGATCATCC GGGAGACCTA CGAGCGCGAC GGCTCGGTCC TGATCCCCGC CTTCGCTGTC GGGCGATCTC AGGAACTCAT GCTCGTCCTC GAAGAGGCGA TGCGTGAGGG TGACATCCCG GAGATGCCGG TCCATCTCGA CGGGATGATG TGGGAGGCGA CGGCCATCCA CACCACCTAT CCCGAGTATC TCCGGGACGA CCTGCGGGAT CGGATCTTCC ACGACGACGA GAACCCCTTC CTCGCCGACC AGTTCAACCA TATCGACGGC GGCGAGGAGG AGCGCCAGGA AGTCACCGAC GGCGAACCGG CGATCGTCCT TTCGACGTCG GGGATGGTCA CTGGCGGGCC GATCATGTCC TGGCTCGAAC ACTTCGGCTC CGATCCGGAC TCGACGCTCA CCTTCGTCGG CTACCAGGCC CAGGGGACCC TCGGCCGGCG GATCCAGAAC GGCTGGGACG AGATCCCGAT GAACAACGGT AACGGTCGCG GTCGGGGCAA CACGCTCTCC CTGGAGATGA ACGTCGAGAC CGTCGACGGC TTCTCCGGCC ACGCCGACCG CCAGGGCTTA GAGAACTTCG TGAAGACGAT GAACCCCCGT CCGGAGAAAG TGCTCTGTGT CCACGGCGAC GAATCCTCGG TCCAGGACCT CTCGTCGGCG CTCTATCACG AGTACAACAT GCGGACGTTC GCGCCCAAGA ACCTCGAAAC CTTCCGGTTC GTCTAG
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Protein sequence | MSNVDQQLAD TKETIVSEVP NDISITDVTY EGPELVIYTR DPKSFAENGD LVRRLASKLR KRITVRPDTD VLSPPREARD EVHSVIPEEA SVTDLDFHED TGEVVIEAEK PGMVIGRHGS TLREITQKVG WTPEVVRTPP IESSTVSNVR NFLKQERDDR RDILERVGRQ IHREEMSDDE WVRITTLGCC REVGRASFIL STPETRVLID AGDKPGAEDE YPYLQVPEAL GVGASSIDAV VLTHAHLDHS ALIPLLFKYG YDGPIYTTEP TRDLMGLLTL DYLDVAAKEG RAPPYDSEMV REAIKHTIPI EYGDVTDISP DIKLTMHNAG HILGSAISHF HIGDGLYNVA FSGDIHYDDT RLFNGAVNEF PRVETLVLES TYGGRNDYQT DQADSEQRLK EIIRETYERD GSVLIPAFAV GRSQELMLVL EEAMREGDIP EMPVHLDGMM WEATAIHTTY PEYLRDDLRD RIFHDDENPF LADQFNHIDG GEEERQEVTD GEPAIVLSTS GMVTGGPIMS WLEHFGSDPD STLTFVGYQA QGTLGRRIQN GWDEIPMNNG NGRGRGNTLS LEMNVETVDG FSGHADRQGL ENFVKTMNPR PEKVLCVHGD ESSVQDLSSA LYHEYNMRTF APKNLETFRF V
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