Gene Huta_2691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2691 
Symbol 
ID8384996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2756254 
End bp2757513 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content67% 
IMG OID644973765 
Productdiaminopimelate decarboxylase 
Protein accessionYP_003131585 
Protein GI257053752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCACT CGCCGCCGGT TCGTCGCCTC GCCGACTGGG ATCACGAGCA GTTACTCGCT 
CTCGCTGCCG AGTACGAGAC CCCACTGTAC GTCCTTGAGA CCGGACGCGT CCAGGCAAAT
TACCGCCGGT TCGACGCCGC GTTCCCGGAT GCCGAGGTAA TGTACGCCGC AAAGGCACAC
ACCGGCCGGG CTGTCCTCTC TGCATTGCTC GACGTCGGTG CCGACATCGA GTGTGCTGCC
CGCGGGGAGT TACAGCGGGC GATCGAAGCG GGCGCAGACC CGAACACACT CCAGTACACG
GCCGTCAACC CGCCCGCCGC GGACCTTGAC TACGCTGTCG AACTCGCCGA CGAGTACCCC
GGGCTGACGA TCACTGGCGG CGCTCGGGAC ACGTTTGACC GCCTCCAAGC GCGCGGGTAC
GACGGCCGCG TTGCCATCCG GATCAATCCC GGGATCGGGA CCGGCCATCA CGAGAAGGTC
GCGACGGGCA AGGACGCGAA GTTCGGGATC CCGGCCGAGC GCGTCCCCGA TCTCGCTGCC
GATCTCCGGG AGCGATTCGA TCTGGTTGGT CTGCACGCCC ACGTTGGCAG CGGCGTCCTG
ACGGGCGAAG TCGACGAGCA CGCCCGTGCG CTCGGCAAAG TTGCAGACCT CGCGCGGGAG
GTCGGCGACG GCGACTTGGA GTTCGTCGAC TTCGGCGGCG GGTTCGGCGT CCCCTATCGC
GAGGACGAAC CACCGCTCGA CATCGAAGTC GTCGCCGAGA CGGTCCGGGA GGCGGTGGGC
GACCTCAACG CGACGATGAA GTTCGAACCC GGCCGATACG TCGTCGCCGA CGCCGAGTTG
ATCCTCGCGA GGGTCAACAC GGTCAAGGAA GCTCCCGAGA CGACTGTCGT CGGCGTCGAT
GCCTCGCTGT CGACGCTGAT CCGGCCGGCG ATGTTCGATT CCTACCATCC GATACGGAAC
GTCTCCGCGC CGGATCGGGC GGACGAGGCA GTCTCCGTCG GCGGCCCCTG TTGTACCAGC
GCGGACGTCT TCGCGACCGA CCGACCGATC GCTCGCCCCG AACGCGAGGA CATTCTCGCG
ATCGGCAACG CCGGCGCGTA CGGGTACGAA CTCGCGAACA ATTTCCACTC CCAGCCCCGG
CCTGCAGAGG TCGCGATCGA GGGCGACGGC GCACGCATTG TTCGTCGCCG GGAGACGATG
GCCGACGTCA CGCGCGTCGA GGACGAGACG GCCGGCGCGC CCGATGCGGA GCGTGAGTGA
 
Protein sequence
MSHSPPVRRL ADWDHEQLLA LAAEYETPLY VLETGRVQAN YRRFDAAFPD AEVMYAAKAH 
TGRAVLSALL DVGADIECAA RGELQRAIEA GADPNTLQYT AVNPPAADLD YAVELADEYP
GLTITGGARD TFDRLQARGY DGRVAIRINP GIGTGHHEKV ATGKDAKFGI PAERVPDLAA
DLRERFDLVG LHAHVGSGVL TGEVDEHARA LGKVADLARE VGDGDLEFVD FGGGFGVPYR
EDEPPLDIEV VAETVREAVG DLNATMKFEP GRYVVADAEL ILARVNTVKE APETTVVGVD
ASLSTLIRPA MFDSYHPIRN VSAPDRADEA VSVGGPCCTS ADVFATDRPI ARPEREDILA
IGNAGAYGYE LANNFHSQPR PAEVAIEGDG ARIVRRRETM ADVTRVEDET AGAPDAERE