Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2691 |
Symbol | |
ID | 8384996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2756254 |
End bp | 2757513 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644973765 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003131585 |
Protein GI | 257053752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCACT CGCCGCCGGT TCGTCGCCTC GCCGACTGGG ATCACGAGCA GTTACTCGCT CTCGCTGCCG AGTACGAGAC CCCACTGTAC GTCCTTGAGA CCGGACGCGT CCAGGCAAAT TACCGCCGGT TCGACGCCGC GTTCCCGGAT GCCGAGGTAA TGTACGCCGC AAAGGCACAC ACCGGCCGGG CTGTCCTCTC TGCATTGCTC GACGTCGGTG CCGACATCGA GTGTGCTGCC CGCGGGGAGT TACAGCGGGC GATCGAAGCG GGCGCAGACC CGAACACACT CCAGTACACG GCCGTCAACC CGCCCGCCGC GGACCTTGAC TACGCTGTCG AACTCGCCGA CGAGTACCCC GGGCTGACGA TCACTGGCGG CGCTCGGGAC ACGTTTGACC GCCTCCAAGC GCGCGGGTAC GACGGCCGCG TTGCCATCCG GATCAATCCC GGGATCGGGA CCGGCCATCA CGAGAAGGTC GCGACGGGCA AGGACGCGAA GTTCGGGATC CCGGCCGAGC GCGTCCCCGA TCTCGCTGCC GATCTCCGGG AGCGATTCGA TCTGGTTGGT CTGCACGCCC ACGTTGGCAG CGGCGTCCTG ACGGGCGAAG TCGACGAGCA CGCCCGTGCG CTCGGCAAAG TTGCAGACCT CGCGCGGGAG GTCGGCGACG GCGACTTGGA GTTCGTCGAC TTCGGCGGCG GGTTCGGCGT CCCCTATCGC GAGGACGAAC CACCGCTCGA CATCGAAGTC GTCGCCGAGA CGGTCCGGGA GGCGGTGGGC GACCTCAACG CGACGATGAA GTTCGAACCC GGCCGATACG TCGTCGCCGA CGCCGAGTTG ATCCTCGCGA GGGTCAACAC GGTCAAGGAA GCTCCCGAGA CGACTGTCGT CGGCGTCGAT GCCTCGCTGT CGACGCTGAT CCGGCCGGCG ATGTTCGATT CCTACCATCC GATACGGAAC GTCTCCGCGC CGGATCGGGC GGACGAGGCA GTCTCCGTCG GCGGCCCCTG TTGTACCAGC GCGGACGTCT TCGCGACCGA CCGACCGATC GCTCGCCCCG AACGCGAGGA CATTCTCGCG ATCGGCAACG CCGGCGCGTA CGGGTACGAA CTCGCGAACA ATTTCCACTC CCAGCCCCGG CCTGCAGAGG TCGCGATCGA GGGCGACGGC GCACGCATTG TTCGTCGCCG GGAGACGATG GCCGACGTCA CGCGCGTCGA GGACGAGACG GCCGGCGCGC CCGATGCGGA GCGTGAGTGA
|
Protein sequence | MSHSPPVRRL ADWDHEQLLA LAAEYETPLY VLETGRVQAN YRRFDAAFPD AEVMYAAKAH TGRAVLSALL DVGADIECAA RGELQRAIEA GADPNTLQYT AVNPPAADLD YAVELADEYP GLTITGGARD TFDRLQARGY DGRVAIRINP GIGTGHHEKV ATGKDAKFGI PAERVPDLAA DLRERFDLVG LHAHVGSGVL TGEVDEHARA LGKVADLARE VGDGDLEFVD FGGGFGVPYR EDEPPLDIEV VAETVREAVG DLNATMKFEP GRYVVADAEL ILARVNTVKE APETTVVGVD ASLSTLIRPA MFDSYHPIRN VSAPDRADEA VSVGGPCCTS ADVFATDRPI ARPEREDILA IGNAGAYGYE LANNFHSQPR PAEVAIEGDG ARIVRRRETM ADVTRVEDET AGAPDAERE
|
| |