| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_2392 |
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| Symbol | |
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| ID | 8384691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 2441129 |
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| End bp | 2443624 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644973465 |
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| Product | Fibronectin type III domain protein |
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| Protein accession | YP_003131291 |
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| Protein GI | 257053458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACG ACGATTCACA CGACATCGAC GCATCGGCAC ACGAATCAGA CGACGTCCAC
GACGCGAGCG AACCCACGAC CGACGGGGAG GGGCCCGCCG GTTCGATGGA ACGGCGGGAC
TATCTGCGGG CGGTCGCGGC GGCCGCAGCC CTTGGCGGAC TCGGGGGTGC AGCGACGGGC
GGCGCGGCCG CGGAGACCGC GGACACCTCG CTGGATATCG ACGAGCGCAT CGAGGAACAC
CGGACTGGCA ATCTGGAAGT CGTCGTCGAG AACCCCGACG GCTCGACGGT CTCGGATGCC
AGTGTTGCGG TTTCCCAGCA GGAACACGAC TTTGGCTTCG GGACGGCCGT CAACGCGAAC
ACGCTGATCA ACAGCTCCAG CGAGGGCGAC AACTATCGGG AGTACATCCC CGAACTGTTC
AACAAGGCGG TGATGGAGAA CCGCCACAAG TGGGACTTCT GGGAGAACGA ACAGCAACTG
GCCGACGAGG CGACCGAGTG GATCTTGAAT CAGGGCCTGG ACATGCGGGG GCACGTCTGC
ATCTGGGGCC GGGAGGACGT CGCGGCGATC CCGGACGACA TCCTGACGGC GATCGACGAG
GGTGACGAGC AGACGATCCG CGAGCGCTCG ATGGCTCACA TCGAGGAGAT CATCACCCAC
TACGGCGACG ACTTCACCGA GTGGGAGGTC GTCAACGAGG CGATGCACGC CTATCAGCTG
CAGATCGGCG TCTACGGCGA CCAGATCGAC ACCGAGGAGC CCTGGACCGG CGACGTCGTC
CCCTGGACCT CCGAACTGCT GGCCGACTGG TACGATCAGG CCGAGTCGGT GATCGAGGAG
AACGGCCTCG ACGTCGGGAT CGCCGTCAAC GACTTCAACC AGTTCGCGTA CGGCTACACC
GACAACCGGT ACGTCAACGA GATCCAGCAT ATCAACGACA ACGCTGTCCA GCTCGATACG
GTCGGCCTTC AGGCTCACGC CGGTGCCCGG ACGGGCGAGT TCAATTCCAA CGACAGCCCG
GACGGCCGGA TCAGCGCCGC ACAGGTCACC GAGGAGATGA ACAAGTGGGC GGATCTCGGT
GCGCGCCTGA AGATCACGGA GTTCGACACG TACAACGGCG ACGACTGGAA TTCCGACGAG
GAGCGCGCGG AGGTCTTAGA GAATTACCTC CGCGGAGCGT TCAGCCATCC CGGGTGTGAC
GACTTCATCA TGTGGGGCTT CTGGGACGGC CGCCACTGGG AGAACGAGGC ACCGCTGTTC
TACGATGATT GGTCGACAAA GCCGGCGTAC GATGTCTGGA CCGGGCTGGT GTACGACGAG
TGGTGGACCG ACGATTCCGG CACGACCGAC GCCAGTGGAA CCTACGCCAC GACGGCGTTC
CTGGGTGACC ACGAAGTCAC CGTCAGCACC GACAGCGCGG AGACGACTGA GACAGTCTCG
GTCTCGGACG CTTCGGGCAC GACGACGGTG ACAGTGACGC TCGAAGGCGA CGGGGAAAGC
GATGGCGACA CCCAGCCACC AGAAACGCCG ACGAACCTGA CCGCGACCGA TTCCACGAGT
TCCTCGATCA CCGTCTCCTG GGACGGCGTG ACGGACAACG GAACGTCGGG GCTCGATGTC
TACGTCGTCT CAGTCGATGG CAGCGAGGAC CAGACCGTCG GCGCCGGGAT GACGACAGCG
ACGATCGACG GGCTGGATGC CGCCACGACC TACGAGATCG GGGTTTCGGC CGTCGACGGT
GCGGGCAACG AGTCCGAGAC GGCGACCGTC CAGGCAACGA CTGACGAGGA TGGCGATGGT
GATGGCGACG GAGATAGCGA TGGCGATGGT GATGGCGATG GCAACGGCGA TGGCGATGGT
GAAGAAGACG GTGACGAAAC TGGCGACGGT GATCTGATCG CCGAGATGGA CCCGAGTACG
ACCAGCCCCG CGGTCGGCGA GCGGGTCACC TTCCGGGTGA CGGATACGAC CGACTCGGGC
AACTGGATCA GCTCCCTGGA GTGGGACCTC GGCAACGGCG ACACGGCGAG CGGCTGGTAC
ACCGAGACGA CCTACGAGTC CGCCGGCACC TACACCGTGG CGCTGACGGC GACGAATAAC
GACGACGAGT CCACCACCCA CGAGGTCGAT ATCGTCGTCG GCGGTGGTGA CGGCGATGGC
GACGGAGAGG GAGATGGCGA CGGTGATGGC GACGGTAACG GCGACGGTGA TGGCGACGGT
GACGGTGATG GAACGACCGG CGATCTCGTC GCCGAGATCG ATCCGAGCAC GACGGAAGCC
AGCGTCGGCC AGACGGTCCA GTTCTGGCTC ACTGACGCGA CAGGGTCCGC GAACTGGATC
ACCGGGGCCG AGTGGGATCT CGGCAACGGC GACACGGGTA GTGGCTGGTA CGCGGAGACG
ACCTACGATG CCGCCGGCAC CTACACCGTC TCGTTGACTG CGACAGACAA CGACGACGAG
TCCACGACTG ACGAGGTGAC CATCACAGTC TCCTGA
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| Protein sequence | MTHDDSHDID ASAHESDDVH DASEPTTDGE GPAGSMERRD YLRAVAAAAA LGGLGGAATG
GAAAETADTS LDIDERIEEH RTGNLEVVVE NPDGSTVSDA SVAVSQQEHD FGFGTAVNAN
TLINSSSEGD NYREYIPELF NKAVMENRHK WDFWENEQQL ADEATEWILN QGLDMRGHVC
IWGREDVAAI PDDILTAIDE GDEQTIRERS MAHIEEIITH YGDDFTEWEV VNEAMHAYQL
QIGVYGDQID TEEPWTGDVV PWTSELLADW YDQAESVIEE NGLDVGIAVN DFNQFAYGYT
DNRYVNEIQH INDNAVQLDT VGLQAHAGAR TGEFNSNDSP DGRISAAQVT EEMNKWADLG
ARLKITEFDT YNGDDWNSDE ERAEVLENYL RGAFSHPGCD DFIMWGFWDG RHWENEAPLF
YDDWSTKPAY DVWTGLVYDE WWTDDSGTTD ASGTYATTAF LGDHEVTVST DSAETTETVS
VSDASGTTTV TVTLEGDGES DGDTQPPETP TNLTATDSTS SSITVSWDGV TDNGTSGLDV
YVVSVDGSED QTVGAGMTTA TIDGLDAATT YEIGVSAVDG AGNESETATV QATTDEDGDG
DGDGDSDGDG DGDGNGDGDG EEDGDETGDG DLIAEMDPST TSPAVGERVT FRVTDTTDSG
NWISSLEWDL GNGDTASGWY TETTYESAGT YTVALTATNN DDESTTHEVD IVVGGGDGDG
DGEGDGDGDG DGNGDGDGDG DGDGTTGDLV AEIDPSTTEA SVGQTVQFWL TDATGSANWI
TGAEWDLGNG DTGSGWYAET TYDAAGTYTV SLTATDNDDE STTDEVTITV S
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