Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2373 |
Symbol | |
ID | 8384672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 2417443 |
End bp | 2419002 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644973446 |
Product | phytoene desaturase |
Protein accession | YP_003131272 |
Protein GI | 257053439 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.145608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTT CAACGGATTT CGACGTCACT ATCGTCGGCG GGGGCTTTGG CGGGCTTTCG GCGGCCTGTC ACCTCGCCGA CGCCGGTGTC GACGTGACGA TCGTCGAGAA AAACGAGGCC GTCGGGGGCC GTGCCTCCCG ACTGGAACGT GACGGGTTCG TCTTCGACAT GGGGCCATCG TGGTATCTCA TGCCCGAGGT GTTCGAACGC TTCTTCGAAC ATTTCGGTCA CGAACCCGAG GATTACTACG AACTCGAACG GCTGGATCCG CACTATCGGA TCTTTTTCAA AGACAACGAG GCGGGAAGCG CCTCGGAACG GTCGAGCGGA CAGGCCCTGC AGGCAGGGAG CGACGTGGTC GATATCAGCG CGAACCGCAA CGAAAACCGC GAACTCTTCG AGTCCTATGA GGACGGGGCC GGCGAGGCCT TCGATGCGTA TCTCACGACG AGTCAGCGCC ACTACGAGAT GTCCATGGAG AACTTTGTCT ACGAGTACCG TCCGTCCTGG AAAGACTGGA TCGACCCGTC GCTCATGAAG ACTGGCACAC TCGGACTGAA ACTGTTTCAG TCGATGCAAG GCCACGTCGA GGACTATTTC GAGAACGAAA AACTCCAGCA GATCGTCCAG TACACGCTGG TCTTCCTCGG CGGCTCGCCA TCAAACACGC CCGCGATCTA CAACATGATG AGCCACGCCG ACTTCAACCT CGGCGTCTAC TATCCCCAGC CCGTCGACGG TGGACCGGGC GGCATCGGTG CCGTCGTCGA CGCGATCGTC GATCTCGCCG AGGAACTGGG CGTGACCATC GAGACCGACA CCGAGGTCAC CGAAATCACT CGCCGCAAGG ACGGGTTCCT CCTGGAAACG GCCGACGGCG ACCAGCGCCG TCCCGACGTG GTCGTCGCCA ACGCCGACTA CGCCCACGCC GAGCAGGATC TCATGCCGGC CCACGAACGC CAATATGACG CCGGCTATTG GGACGACCGG ACCTACGCCC CTTCGGCGTT TCTGCTATAT CTCGGCGTCG AGGGCGAGGT TCCCGAACTC GAACACCATT CACTCGTGTT TCCGACCGAC TGGGGCGAGT ACTTCGACGA CATCTTCGAG GATCCGGCCT GGCCCGAGGA TCCCTCCTAC TACCTGTGTG TCCCCTCGAA GACCGACGAC GACGTGGCTC CCGAGGGCCA CACCAACCTC TTTGCGTTGG TCCCGATCGC CACCGAACTC GATGACCCAC AGGAGACGCG GGATCGCTAC CGCGACAAAA TCATCGCCGA CATCGCCGAG AACACCGGCG TCGAACTCGA AGACCGGATC GTCGTCGAGG AACAGTTCTC CATCTCCGAG TTCGCCGACC GGTACAACGC GACGAAGGGC ACCGCGATGG GGCTGGCACA CACCCTCCGC CAGACGGCGA TGCTCCGGCC GCCCATCGAG TCTTCGGCGG TCGATGATCT GTACTTCACC GGGGGCTACT CGACGCCGGG GGTCGGCGTG CCGATGTGTC TGATCAGCGG CGAACACGCA GCCGAGGCCG TCCTCGAAAA CAGTCGATGA
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Protein sequence | MTSSTDFDVT IVGGGFGGLS AACHLADAGV DVTIVEKNEA VGGRASRLER DGFVFDMGPS WYLMPEVFER FFEHFGHEPE DYYELERLDP HYRIFFKDNE AGSASERSSG QALQAGSDVV DISANRNENR ELFESYEDGA GEAFDAYLTT SQRHYEMSME NFVYEYRPSW KDWIDPSLMK TGTLGLKLFQ SMQGHVEDYF ENEKLQQIVQ YTLVFLGGSP SNTPAIYNMM SHADFNLGVY YPQPVDGGPG GIGAVVDAIV DLAEELGVTI ETDTEVTEIT RRKDGFLLET ADGDQRRPDV VVANADYAHA EQDLMPAHER QYDAGYWDDR TYAPSAFLLY LGVEGEVPEL EHHSLVFPTD WGEYFDDIFE DPAWPEDPSY YLCVPSKTDD DVAPEGHTNL FALVPIATEL DDPQETRDRY RDKIIADIAE NTGVELEDRI VVEEQFSISE FADRYNATKG TAMGLAHTLR QTAMLRPPIE SSAVDDLYFT GGYSTPGVGV PMCLISGEHA AEAVLENSR
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