Gene Huta_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2145 
Symbol 
ID8384439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp2190122 
End bp2191015 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID644973214 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003131045 
Protein GI257053212 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.292783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAC TGGTTCTCGG TGCCGGTGGG CTGCTCGGTA GCAACGTCGT CCACCACGCC 
CTCGAGGACG ACTTCGCGGT CTCCGGGACG TACTACGAAG CGGAGCCATC GGTGGATGCA 
CCGCTCGCGA AAGTAGATAT CCGCGATCGA GAGGCAATCC GAGAGCAACT CGAGGAACGA 
CGACCGGACG CAGTCATCAA CTGTGCGGCG ATGACCGACG TCGACGCCTG CGAGACGGCA 
TCCGGGGTGG CCCACGAGAT CAACGCCGAA GCACCGGGAC AGATCGCCTC AGCGTGCGCG 
GAGCGCGCCA TTCCACTGGT CCACGTTTCG ACGGATTACG TCTTCGATGG CGACACTGAC 
ACGCCGTACA CTGAATCGGC AACGCCGAAT CCGATTCAGG TGTACGGAGA ATCGAAACGC 
GACGGCGAGG TGCGTGTCAG AGAATCCGAG GCCGAGACGA TCATCGTCCG GCCGTCGTTC 
ATCTACGGTG TCCACCGCGC CAGTGGAGAG CTGACGGGAT TCCCTGCCTG GGTCCGGGAC 
CGCCTCGCAG CCGGCGAGTC GACGCCGCTG TTCACGGACC AGTGGGTGAC ACCGAGCCGG 
GCCGGGGCGA CTGCCTCGAC GATCCTCGCA CTCCTTGAGA CCGAGTTCCA CGGGACTGTC 
CACGTCGCGA GTCGATCGTG CGTTATGCCG TATACGTTCG GACAAGCGAT CTGTCGACAG 
ATGGATGCGC CGGCGGTGTT ACTTGAAGAG GGATCACAGA CTGAGGTCGA CCGGGCTGCC 
GCTCGACCGA CCGATACCTG TCTGGCGGTC GATCGGGTCG AGTCAGTGCT CGATCGGCCA 
CAGCCGACAC TCGAGGCGGA CCTCACGGCG ATCGAGCCCT GGTTGTCGGG CTAG
 
Protein sequence
MDILVLGAGG LLGSNVVHHA LEDDFAVSGT YYEAEPSVDA PLAKVDIRDR EAIREQLEER 
RPDAVINCAA MTDVDACETA SGVAHEINAE APGQIASACA ERAIPLVHVS TDYVFDGDTD 
TPYTESATPN PIQVYGESKR DGEVRVRESE AETIIVRPSF IYGVHRASGE LTGFPAWVRD 
RLAAGESTPL FTDQWVTPSR AGATASTILA LLETEFHGTV HVASRSCVMP YTFGQAICRQ 
MDAPAVLLEE GSQTEVDRAA ARPTDTCLAV DRVESVLDRP QPTLEADLTA IEPWLSG