Gene Huta_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2143 
Symbol 
ID8384437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp2188870 
End bp2189943 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID644973212 
Productglucose-1-phosphate thymidyltransferase 
Protein accessionYP_003131043 
Protein GI257053210 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form
[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.591307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGAG TGCTACTCGC CGGGGGGACC GGCTCCCGGC TGCGACCGAT CACCCACACG 
GGCCCGAAAC AGCTGTTGCC GGTGGCGAAC AAACCCGTCC TCGAATACGC GGTCGAGGAC 
CTCAAGGACG CCGGCATCAC CGATATCGGG GTCGTCCTGG GTCACAAGGG CCGCGAGGCG 
ATCCAGGAAC TCCTCGGGGA CGGCTCCGAG TACGGCGTCG ATATCACCTA CATCGTCCAG 
GGGAATCCAC TCGGCCTAGC TCACGCGGCG GGATGTGCCC GTGACTTCGT CGGCGACGAC 
GACTTCGTGA TGTACCTGGG TGACAACATC CTCAAACAGG GCATCGAGGA CCTCGTCGAG 
AGCTTCCAGG CGGGCGAGTA CGGCGCGGGC ATCGCCCTCC AGGAGGTCCA GAACCCTTCG 
GAGTTCGGCA TCGCCGAGAC CGACGCCGAC GGGGCGGTCA CGCGCCTCGT CGAGAAGCCG 
GCGGATCCGC CGAGCAACCG CGCGCTGATC GGCATCTACG TCTTCTCGAA CGATGTCTTC 
GACGTCATCG AGGAGTTAGA ACCGTCCTGG CGGGGCGAAC TCGAGATCAC CGACGCGATC 
CAGGACCTCC TGGAGGAGGG CAACCCAATC GACTCTCATG TCGTCGAGGG CTGGTGGAAG 
GATACCGGCC GGCCACAGGA CATTCTCGAC GCGAACCGTC TCGTCCTGGA GGACGTCGCC 
GACGACCGGG CGGGTGAGAT CTCGACCGAC GCCGAGGTGA CGGGCAGAGT CGATCTGGCA 
CCGTCGGCGA GGGTCGAGGC GGGGGCGGTG ATCCGCGGTC CGGTGTCGAT CGAGGCGGGG 
ACGACGATCG GCCCCGGGAC TTACGTCGGC CCGTATACGT CCATTGGACC GGACTGTGAG 
CTGGCCGACG TCCACGTCGA GAACACGGTC CTCGTCGGGG AGTCTGAAGT AACCTCCGCC 
GAAACGATCG TGGACAGTCT CATCGGTCGG AACACCCGAA TCGGGAGTGC GGCCGACGAA 
CGCCCGGCGG GACGACGACT CGTCGTCGGC GAGAACTCGA ATCTCAAGCT CTAA
 
Protein sequence
MKGVLLAGGT GSRLRPITHT GPKQLLPVAN KPVLEYAVED LKDAGITDIG VVLGHKGREA 
IQELLGDGSE YGVDITYIVQ GNPLGLAHAA GCARDFVGDD DFVMYLGDNI LKQGIEDLVE 
SFQAGEYGAG IALQEVQNPS EFGIAETDAD GAVTRLVEKP ADPPSNRALI GIYVFSNDVF 
DVIEELEPSW RGELEITDAI QDLLEEGNPI DSHVVEGWWK DTGRPQDILD ANRLVLEDVA 
DDRAGEISTD AEVTGRVDLA PSARVEAGAV IRGPVSIEAG TTIGPGTYVG PYTSIGPDCE 
LADVHVENTV LVGESEVTSA ETIVDSLIGR NTRIGSAADE RPAGRRLVVG ENSNLKL