Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_2113 |
Symbol | |
ID | 8384407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 2149476 |
End bp | 2151116 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644973182 |
Product | chaperonin Cpn60/TCP-1 |
Protein accession | YP_003131013 |
Protein GI | 257053180 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAC AGGCTGGCGA CCCGACGCTT TCGGTACTCT CAGAGGAGTC CCAGCGCATC GACGGCAAGG ACGCGCGTTC GATGAATCTC ACGGCCGCCC GGGCGATGGG CGAGGCCGTC AGGACGACGC TCGGTCCGCG AGGCATGGAC AAGATGCTCG TCGACTCGAC GGGCGACACT GTCGTCACGA ACGACGGCGT CACCATCCTC GACGAGATGG AGGTCGAGCA CCCAGCGGCC AACATGGTCG TCGAGGTGGC ACAGAGCCAG GAGCAGGAGG TCGGCGACGG CACCACCTCG GCGGTGATTC TCACGAGCGC GTTGCTCGAC GCGGCCGAGG ACTTGCTTGA AAACGACGTG CACCCGACGA CGATCACCGC CGGGTTCGAG CAAGCGGGCG ACCACGTCGC GAGTGTCCTC GACGACCTGG CGATTGATCT CGACGCCGAG GACACGGAGA CGCTCGAAGC GATCGCCTCG ACAGCGATGA CCGGCAAGGG GGCCGAATCC GAGAAGGACC ATCTGACGAC GCTGGTCGTC GACGCCATCC GGGCGGCGGT GCAGGCGGAC GGCACGGTCG ATCGCGACGC CGTCACGATC AAGACCTTCG CGGGCAGCAA CCTCGCCGAT TCGCGGCTGA TCGAAGGGGT CACCGTCAGC AAGAACCCGC CACACGACGC GATGCCGACG GACCTCGCCG AGGCCGACGT ACTGGTGTAC GAGGGAGAGA TCGAAGTCCC GGAACTCGAG ACCGCGACCG AGACCCGCGT CTCGGACTTC GAGGAGGTGA CCGAGTACCT CGATCAAGAG CAGGCGGCCA TCCAGGAGGA CGTCGAGGCC ATCCTCGAAA CCGGGGCGGA CGTCCTGATC ACGGAGGGCG GGATCGACGA TCCGGCCCAG AAACTGCTTG CTGAGGCGGA CATCCTGGCA CTGCGCCGTG TCGACGACGA GGACCGACGG CGACTCGCCG AGGCGACCGG TGCGTCGCGG ATTTCGGACC TCGAAGCCGC GACACCCGAG GATCTAGGAC GGGCCGGGGA AGTCGGCCAG GAACGGGTTC GGATGCCGCT GTGGCGCGGT GACGCCCGAC CCGAGCGGAT CACGTCCTTC ACCGACGTCG ACAGCGTGGC CGGGACGATC GTCCTCCGGG GCGGGACCGA ACACGTCGTC GACGAGGTCG AACGCGCACT CGAGGACAGC CTCGACGTGC TCGCGGCGGC CATCGAGGAC GGCGAGATCC TGCCGGGGGC CGGAGCGGTC GAGATCGAAC TCGCACTCGC ACTCGAGGAC GCGGCCGACG GGGTCAGCGG GCGCGAGCAA CTCGCCGTCG AGGCCTTCGC CGACGCGCTC GACATCTCGC CGCGGACGCT CGCGGAGAAC GCCGGCCACT CCCCGATCGA CGCGCTCGTC GACCTCCGCG CGCGCCACAC CGACGGCGAG GTGAGCGCCG GAATCGATGC CGAGAGCGGC GAACTCATCG ACGCAGCCGC CGAGGGAATC GTCGAACCCC GCCGTGTGAA GGCGACGGCG TTCGACGCAG CGATCGAGGC GGCACGGACG ATCCTCCGGA TCGACGACGT CGTCTCCGCC GGCGATCTCT CGACGAGCGG CGACGACGAC GGCGGCGCAC CCGGAATGTA G
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Protein sequence | MAQQAGDPTL SVLSEESQRI DGKDARSMNL TAARAMGEAV RTTLGPRGMD KMLVDSTGDT VVTNDGVTIL DEMEVEHPAA NMVVEVAQSQ EQEVGDGTTS AVILTSALLD AAEDLLENDV HPTTITAGFE QAGDHVASVL DDLAIDLDAE DTETLEAIAS TAMTGKGAES EKDHLTTLVV DAIRAAVQAD GTVDRDAVTI KTFAGSNLAD SRLIEGVTVS KNPPHDAMPT DLAEADVLVY EGEIEVPELE TATETRVSDF EEVTEYLDQE QAAIQEDVEA ILETGADVLI TEGGIDDPAQ KLLAEADILA LRRVDDEDRR RLAEATGASR ISDLEAATPE DLGRAGEVGQ ERVRMPLWRG DARPERITSF TDVDSVAGTI VLRGGTEHVV DEVERALEDS LDVLAAAIED GEILPGAGAV EIELALALED AADGVSGREQ LAVEAFADAL DISPRTLAEN AGHSPIDALV DLRARHTDGE VSAGIDAESG ELIDAAAEGI VEPRRVKATA FDAAIEAART ILRIDDVVSA GDLSTSGDDD GGAPGM
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