Gene Huta_2101 details

Gene Information

• Locus tag: Huta_2101
• ID: 8384395
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 2139360
• End bp: 2139935
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644973170
• Product: NADH ubiquinone oxidoreductase 20 kDa subunit
• Protein accession: YP_003131001
• Protein GI: 257053168
• COG category: [C] Energy production and conversion
• COG ID: [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.656537
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAC AGACTGAAGC GGAGGCACAG GATGACGACC GGACGACCGT CGCGACGGTG 
TGTCTGGGCG GCTGTTCGGG CTGTCACATG GAGTTTCTGA ACGTCGATCA CGGCCTCGTG 
GATCTGGTCG AGGAGGTCGA CATCGTCGCC AGCCACATGA TCGTCGACGA GAAGGGCGTC 
CCGGAGGCCG ACGTCGGCAT CGCCGAGGGC GTCGTCACCA ACGAGGAGAA CGTCGAGGTC 
GCCGAGGAAC TTCGGGAGAA CTGTGACACT GTCGTCGCTT GGGGCGACTG TGCCGCACTG 
CGCGGGATCA TGTCCCTGCG CAACTACCAG GATCGCGACG AGATGTTAGA AGAGACGTTC 
ATGGGCGAGG CCGACGACGA GAGCGAGGTA CCCTTCGGCG ACGACGAGGG CGTCCCGAAA 
CTGCTCGAGG ACGCCCGACC GCTCGATGAG TACATCGACG TCGACGTCTA CGTGCCTGGG 
TGCCCACCCG ACGCCGAGGT CATGAAGGAG AGCCTCGAAG CGCTGGCTCG CGGGGAGACC 
CCCGAGATCG AAGGCGACAA ACTACAGTAC GACTAA 

 

Protein sequence

MSAQTEAEAQ DDDRTTVATV CLGGCSGCHM EFLNVDHGLV DLVEEVDIVA SHMIVDEKGV 
PEADVGIAEG VVTNEENVEV AEELRENCDT VVAWGDCAAL RGIMSLRNYQ DRDEMLEETF 
MGEADDESEV PFGDDEGVPK LLEDARPLDE YIDVDVYVPG CPPDAEVMKE SLEALARGET 
PEIEGDKLQY D