| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1893 |
|---|
| Symbol | |
|---|
| ID | 8384184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1902650 |
|---|
| End bp | 1903885 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644972961 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003130795 |
|---|
| Protein GI | 257052962 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.411885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCC GGTTTCTGGG TGGCGCTGGC GAGGTCGGTC GCAGTGCGAT CCTCGTCAAC
GAGTCGCTGC TGCTGGATTA CGGCATGAAG ACCGAGACGC CGCCGCAGTT TCCCGTCGGC
ACCGTCGACC CCGAGGCCGT CGTCGCTTCC CACGGCCACC TCGATCACGT CGGCTCGATC
CCGTCGCTGC TCTCGGGGAG CCGACGCCCG CCGATCCACT GGACGCCGCC GACCCGGGAA
CTCGCGCTGA CGCTCGCCCG GGACACCCTG AAGCTCCACG GCGGCACCTA CGACTGTCCC
TTCACGGAGG TCGACGTCAG GCGCGTCACC CAGGTCAGCG AGACCCACGG CTATCGCGAG
CCCTTCGAGG TAGCCGGTCA CGAGGTCACC TTCTTCAACG CCGGCCACAT CCCCGGCAGC
GCGCACGTCC TCGTCGACGA CGGCGAAACC CGACTGCTGT ACACCGGCGA CTTTCACACT
GACAACCAAC GGCTGGTCGC AGGAACCACC GCACGCCCTG ACGCGGACGT GGTGCTCACC
GAGAGCACCT ATTCGGACGT CTCCCACGAG GACCGGGCGA CCCTTGAGGA GCGCTTCGCC
GAGAGCGTCA AGACGACGCT GTGGGAGGGC GGCACCGTCG TGATCCCCGC CTTCGCCATC
GGTCGGACCC AGGAGATGCT CATGATCTGT GAAGCCCACG ACATCCCCTG CTATGTCGAC
GGGATGGGAA AGCGGGTGAC AAAGATGCTC CGCCGGCATC CGGAGTTCGT CCGCGATCCG
GACGCCCTCC AGCGCGCCAA ATCACACGCC CGGTTCGTCG ACGGTCGCGA CGGCCAGCGG
AAACGCATCG CGGCACAGAA CACGGCGATC GTCACCACCA GCGGGATGCT CAGCGGTGGC
CCCGCGATGA CCTACATCCC CGAAATTCGG GATCGGCCGG TCAACAAGAT CGCGCTCACG
GGGTATCAGG TCGAGGGGAC GCCGGGCCGG GACCTGCTGG AGACGGGCAG CGCCGAGATC
GACGGGCAGC GGATGCCAGT CGCCGCGCAG GTCGAGTCCT ATGACTTCTC CGCGCACGCC
GACCGTGCGG GCCTCGACGC GTTCCTCGAT GCCTACCGCG AGACGCAACT CCTCGTCAAT
CACGGTGACA GGTGCGAGCA GTTCGCCGCC GAACTCGCCG GCGACGGGTT CGACGCGACG
GCACCCTCTA TCGGCGAGAC GGTCGAAGTC CGATAG
|
|---|
| Protein sequence | MKLRFLGGAG EVGRSAILVN ESLLLDYGMK TETPPQFPVG TVDPEAVVAS HGHLDHVGSI
PSLLSGSRRP PIHWTPPTRE LALTLARDTL KLHGGTYDCP FTEVDVRRVT QVSETHGYRE
PFEVAGHEVT FFNAGHIPGS AHVLVDDGET RLLYTGDFHT DNQRLVAGTT ARPDADVVLT
ESTYSDVSHE DRATLEERFA ESVKTTLWEG GTVVIPAFAI GRTQEMLMIC EAHDIPCYVD
GMGKRVTKML RRHPEFVRDP DALQRAKSHA RFVDGRDGQR KRIAAQNTAI VTTSGMLSGG
PAMTYIPEIR DRPVNKIALT GYQVEGTPGR DLLETGSAEI DGQRMPVAAQ VESYDFSAHA
DRAGLDAFLD AYRETQLLVN HGDRCEQFAA ELAGDGFDAT APSIGETVEV R
|
|---|
| |