Gene Huta_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1821 
Symbol 
ID8384109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1826366 
End bp1827190 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID644972887 
ProductABC transporter related 
Protein accessionYP_003130724 
Protein GI257052891 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.77339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACTCA CGATCGCAGA CCTGCGGTTC AGCTACGACG CCGAGCCGGT CCTCTCGGCC 
GTTGATCTCT CGGTCGAGTC GGGTGAACTG CTCGGACTGC TTGGCCCCAA CGGCTCGGGC
AAAAGCACGC TGTTGCAGTG TCTCAACGGG ATTCTGGAGC CGGACGCGGG AACGGTACGG
ATCGACGGTG ATCCAGTGGC GAAACTGACC AGCGACGAGC GCGCCCGGCG GTGCAGTTAC
GTCCCGCAGG CCGAGTCGGG TGCGTTCCCG GCGACCGTCT TCGAGACCGT GATGCAGGGC
CGACGACCCC ACGGTGGGTG GTCGCCGAGC GCACGCGACC GAGAGGCAAC GGCGAGCGTC
CTCGATCGGC TCGACATCGG GAATCTCGCC GATCGCCAGG TCAGCGAGCT CAGCGGTGGC
CAGCGCCAGA AGGTCCGTCT CGGGCGGGCA CTGGTCGGCG ATCCGTCGGT CACGTTGCTG
GACGAGCCGA CGAGTGCGCT GGACCTCCGC CACCAGTTAG AGGTGATGGA CCTCGTCGTC
GAGCACATTC GAGCCAGCGA AGTGGCCGGC ATCGTCGCGA TTCACGACCT CAACCTCGCC
GCCCGGTACT GCGATCGGAT CGCGCTGCTC GCAGACGGCG AGATCCACGC CGTCGGGCCG
CCCGAAGTCC TGACACCCGA GACGATCCGG ACGGTCTACG GCGTCGAGGC GTCCGTCCGC
GGGCACCGCG ACCGGCAGTT GATCGTGCCC GAAGCGCCGG CCGAGAAAAC CCACACTGCG
GAACAGTCTG CCCGACAGCG CCAACCAGCA TCGACCGACG ACTGA
 
Protein sequence
MTLTIADLRF SYDAEPVLSA VDLSVESGEL LGLLGPNGSG KSTLLQCLNG ILEPDAGTVR 
IDGDPVAKLT SDERARRCSY VPQAESGAFP ATVFETVMQG RRPHGGWSPS ARDREATASV
LDRLDIGNLA DRQVSELSGG QRQKVRLGRA LVGDPSVTLL DEPTSALDLR HQLEVMDLVV
EHIRASEVAG IVAIHDLNLA ARYCDRIALL ADGEIHAVGP PEVLTPETIR TVYGVEASVR
GHRDRQLIVP EAPAEKTHTA EQSARQRQPA STDD