Gene Huta_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1725 
Symbol 
ID8384011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp1735301 
End bp1736320 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content62% 
IMG OID644972791 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_003130630 
Protein GI257052797 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGAG ACGCCCGCTT CCTCCGGGAG GAGTTCGTTC CCCGAGAGGT GGTCCACCGC 
GATCCGGAGA TCAACCACTT ATCAAGTGTC CTCCAGCCAC TCGCAGACGG TCGCCCCGCC 
GACACGGCGT TCATCAGTGG CCCCTCGGGG TCAGGCAAGA CGTGCATTTC GAAGTACACC 
GTCGAACAGC TGAAAGAAGA AAATCTCGAT GTCGAATCCA TCTACGTCAA CTGCTGGAAC 
GACCACTCGC GTTTCCAGGT ACTCTTCCGA ATCCTCGACG AAGTCACGAG TACCGTCGAT 
ATCCATCGCC AGTCAACGCC GCGTGACGTA CTGTTCGACC GTCTTCGCGA TCACGACGGC 
CCACCCTGTG TCGTCATCCT CGACGAGGTC GACCAGCTCG CGGACCGGAA GGTCCTCTAC 
GAACTGCTTG GCTTGCAGTC GTTCTCGCTG GTCCTGATCG TGAACGACGT CGAGGAACTC 
CTCGCCGAGG TGGACGAACG CCTGGCGAGC CGCCTTCGCA GTGCCGAGCG TATCCGCTTT 
CACGCGTACA CGACCGACGA ACTCGTCGAC ATCCTCCGCG AGCGGGCCGA CCGGGCGCTC 
ACGCACGACG CGATTTCACA GGAGCAACTC GAGGCGATCG CCGACGAGGC TGGCGGGGAC 
GCCCGCGTCG CGATCGCGAC GCTCAAACTT GCCGCGCGAC AGGCCGATCG AGACGGTGCC 
GAGCAGATCA CGACCGACCA CGTGAAGCAG GCTGTCCCCG ACGCCCGCGA GGAACTCCGC 
CAGAAGAATC TGGACGCGCT ATCGGAGCAT CAGCAGGTGA TCTACGAGAT CATCGAGGAG 
CACGAGTCGA TCGCCCCCGG CGATCTGTAT CCGGAGTACC GGTCTCGCGT CGACAATCCG 
AAATCCGATC GAACCGTTCG GAGCTATCTC AAGAAGATGG TGCGGTACAA CCTGGTCGCG 
GCCGAAGGAT CGACGCAGGA CCGCCGCTAT CGGAGTCTGG CACCGCCGAG TCCGTCGTGA
 
Protein sequence
MLRDARFLRE EFVPREVVHR DPEINHLSSV LQPLADGRPA DTAFISGPSG SGKTCISKYT 
VEQLKEENLD VESIYVNCWN DHSRFQVLFR ILDEVTSTVD IHRQSTPRDV LFDRLRDHDG 
PPCVVILDEV DQLADRKVLY ELLGLQSFSL VLIVNDVEEL LAEVDERLAS RLRSAERIRF 
HAYTTDELVD ILRERADRAL THDAISQEQL EAIADEAGGD ARVAIATLKL AARQADRDGA 
EQITTDHVKQ AVPDAREELR QKNLDALSEH QQVIYEIIEE HESIAPGDLY PEYRSRVDNP 
KSDRTVRSYL KKMVRYNLVA AEGSTQDRRY RSLAPPSPS