Gene Huta_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1665 
Symbol 
ID8383945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1649033 
End bp1649644 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID644972726 
Productnuclease (SNase domain protein) 
Protein accessionYP_003130571 
Protein GI257052738 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.409735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGAC GTGGTGTGGT CATCGTGATC GTCGTCCTGC TCGCCGGGTG TGGGGGACTG 
CCCGGCGTCG GCACGGACGC GGGGACGGCC AGCACGCCGA CTGGCGCGGG GACCCAGACG 
ACGGACGCGC CACAGGTACC CTCGACCGGC GATCGCTGGA CCGTCACGGT CGTCGAGGTG 
GTCGACGGCG ACACGATGGA CATCGAATAC GCGAACGGCA CCCGCGAGAC GGTTCGGCTG 
CTGGGCGTCG ACGCACCGGA ACCGTATGCC GAGGTCTCGC CCGGCGAGTT CGATGGCGTC 
CCGGACACTG AGGCGGGGCG AACCTGGCTC CGCGGGTGGG GCGAGAACGC GAGCACGTTC 
GCCCAGCGGC GACTGGCCGG TGAGACGGTC CGGATCGTCA CCGACGAGCG GGCGGATCGG 
CGGGGCTACT ACGGCCGACT GCTCGTCTAC GTGGTGGTCG ACGGCGAGGT GTTCGGCGAG 
CAGTTACTCG AGGACGGGTA CGCGCGGCTC TACGAGACGG AATTCCAGCT GTACGATCGC 
TTCGCCGCGG CGGAGTCGCG GGCCCAGGCG GCCGACCGGG GCGTCTGGGG GTTCGCATCG 
GCGCCATCCT GA
 
Protein sequence
MRGRGVVIVI VVLLAGCGGL PGVGTDAGTA STPTGAGTQT TDAPQVPSTG DRWTVTVVEV 
VDGDTMDIEY ANGTRETVRL LGVDAPEPYA EVSPGEFDGV PDTEAGRTWL RGWGENASTF 
AQRRLAGETV RIVTDERADR RGYYGRLLVY VVVDGEVFGE QLLEDGYARL YETEFQLYDR 
FAAAESRAQA ADRGVWGFAS APS