Gene Huta_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1654 
Symbol 
ID8383934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1636753 
End bp1637430 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID644972715 
ProductABC transporter related 
Protein accessionYP_003130560 
Protein GI257052727 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGA TCGAACTCAC GGACGTCGAG AAGTCCTACG GCGAGGCAAC GTCCCTCGAA 
GCGATCTCGC TGTCGTTCGA GCCGGGATGG CACATCGTCC TCGGACCCAA CGGCGCGGGC 
AAGACGACCC TGTTTCGTCT CCTGCTCGGG TTGACGGACC CCGATGCCGG ACAGCTGTCG 
ATCCCCGACG GCTCCGTCGG CTGTAGCTTC CAGGAACCGC AGGTGTACGA GGGGCTCACG 
GTCCGGGAGA ACCTCGAAAC CTTCGGGGAG ATCGCCGGGG CGTCGACGGA CTGGCTCGAA 
ACGCTACTCG AGCGGTGTGG ATTGACCCGG ATGGCCCATC GACCCGCCGG GGCCCTCTCC 
GCGGGATTTC GGTCCCGACT CGACGTCGCC CTGGCGTTCG TGAATCGACC GGATATCGTC 
CTGCTCGACG AACCGCTCGC GGACGTCGAC GACGAGTACG TCGGTCGACT CCGGGAGTTC 
TTCCTCGAGT ATGCCGGACC GGACCGGCTG TTCGTCGTCG CGACCCACCA CCACGACCGG 
TTCATCGAGA TTGCGGACAC GGTGACGATT CTGGCCGATG GACGCGTCCA GTGGACGGGC 
GATCCAGCGA CGGCACCCGC TCACGACGGG GAGATCACGG AACTGTATCG TGACTCGATC 
AGGACCGACG AGACCTAA
 
Protein sequence
MKPIELTDVE KSYGEATSLE AISLSFEPGW HIVLGPNGAG KTTLFRLLLG LTDPDAGQLS 
IPDGSVGCSF QEPQVYEGLT VRENLETFGE IAGASTDWLE TLLERCGLTR MAHRPAGALS 
AGFRSRLDVA LAFVNRPDIV LLDEPLADVD DEYVGRLREF FLEYAGPDRL FVVATHHHDR 
FIEIADTVTI LADGRVQWTG DPATAPAHDG EITELYRDSI RTDET