Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1613 |
Symbol | |
ID | 8383892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1593546 |
End bp | 1595321 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644972674 |
Product | orc1/cdc6 family replication initiation protein |
Protein accession | YP_003130520 |
Protein GI | 257052687 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACA CCGAAGACGA ATCCAACTCA CCCGTCACGG AGGACAGTCT CACCGACGAC CACTCCGAAC CGTCGACCGG CGGTGTCGTC GATCCACCTG CGGGTACTGA CCGCAGTGGC GGTGATTCCG ATCCGGACAG TCCTGACGAA AGCGATCCGG CACCAGACGT CGAAGACGAT GGCGCGGGCG GAGGACTCTC ACACGAAAGC GATCCGCCCG ATTCAAACAG GAACGGGGAC GACGATCCTG TCGACGAAGA CTGGACGACA CGGCCGTCGG AGGAGTCTTT CGGGTCGTCA GTCGAGGCTA CACCGTCCGA TACAGCCGGA TCGATCGACA CAGATCTCCT CGACGAGATC GTCTTCGAGG ACGAGGAGGA CGCGGACGAG GCCTCCAGGG GTCTGTTCGA CGATCTGTTG AGCGGGGAAC CGATCTTCGA GAACAAGGAG GTGCTTCGTC CCTCCTACAC GCCACGGAAA CTCCCCCACC GCGAGGAGCA GATCAACAAC ATGGCGACGA TCCTCGTCGC CGCGCTCCGC GGTGATACGC CGTCGAACAT CCTCATCTAC GGCAAGACGG GGACGGGCAA GACCGCGAGC GCGAAGTTCG TCAGCGAGGA ACTCGAACGT ACCTCCGCGA AGTACGAGGT CCCCTGTGAC GTCGAGTACA TCAACTGCGA GGTGACCGAC ACGCAGTACC GCGTTCTCGC GCAACTCGCC AACACCTTCA TCGAGAACAA CGAGGCCCAC ATCGAGGACC GACTCGCAGA GCTCGAGGAC CTGCAAGACC GCGCCGAGGC CGATCCGAAC GAACTCGAGG GGACGGAGTT CGCCACGCTC GAAGCCGTCA GTGCCGAGAT CGAGTCACTC GAGGACGACC TGGCGTCCTT CGAGACGGTC CCGATGACGG GATGGCCGAC GGATCGGGTC TACAGTACCT TCTTCGACGC CGTCGATTAC ACCGAACGCG TCGTCGTGAT CATGCTCGAC GAGATCGACA AACTCGTCGA GAAAAGCGGC GACGATACCC TCTATAATCT CTCGCGGATG AACTCCGAGC TGGAGAACTC CCGGGTCTCG ATCATGGGCA TCTCCAACGA CCTGAAGTTC ACTGACTTTC TGGACCCTCG CGTCAAGTCC AGTCTCGGTG AAGAGGAGAT CGTCTTTCCG CCCTACGACG CCAACCAGTT GCGGGATATT CTCCAGGCAC GCGCGGACGT CGCCTTCAAG GACGACGCCC TCTCGGAGGA CGTCATCCCG CTGTGTGCGG CCTTTGCAGC ACAGGAACAC GGCGACGCGC GCCGCGCGCT CGATCTCCTC CGGACGGCCG GGGAACTCGC CGAACGCGAC CAGATCGATC TCGTCGCCGA GGACCACGTC CGGCAGGCCC AGGAGAAGAT CGAACTCGAC CGGGTCGTCG AGGTCGTCCG CACGCTGCCC ACCCAGTCGA AACTCGTCCT GTTTTCGATC ATCCTGCTGG AGAAAAACGG CGTCCACAAC ATCAACACCG GCGAGGTGTA CAACATCTAC AAGCGCCTCT GTGAGGAGAT CGACGCCGAC GTCCTCACCC AGCGCCGGGT CACCGACCTC ATCTCGGAAC TCGACATGCT CGGGATCGTC AACGCTGTGG TCGTTTCGAA GGGCCGCTAC GGTCGAACCA AGGAGATCAG TCTCTCGGTT CCCCAGGACG AAACCGAAGC CGTACTCCAC TCGGACTCAC GACTCGGCGA TATCGAAGAC GTCCAACCGT TCATCCAGGC CCGATTCGAT CAGTAA
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Protein sequence | MQDTEDESNS PVTEDSLTDD HSEPSTGGVV DPPAGTDRSG GDSDPDSPDE SDPAPDVEDD GAGGGLSHES DPPDSNRNGD DDPVDEDWTT RPSEESFGSS VEATPSDTAG SIDTDLLDEI VFEDEEDADE ASRGLFDDLL SGEPIFENKE VLRPSYTPRK LPHREEQINN MATILVAALR GDTPSNILIY GKTGTGKTAS AKFVSEELER TSAKYEVPCD VEYINCEVTD TQYRVLAQLA NTFIENNEAH IEDRLAELED LQDRAEADPN ELEGTEFATL EAVSAEIESL EDDLASFETV PMTGWPTDRV YSTFFDAVDY TERVVVIMLD EIDKLVEKSG DDTLYNLSRM NSELENSRVS IMGISNDLKF TDFLDPRVKS SLGEEEIVFP PYDANQLRDI LQARADVAFK DDALSEDVIP LCAAFAAQEH GDARRALDLL RTAGELAERD QIDLVAEDHV RQAQEKIELD RVVEVVRTLP TQSKLVLFSI ILLEKNGVHN INTGEVYNIY KRLCEEIDAD VLTQRRVTDL ISELDMLGIV NAVVVSKGRY GRTKEISLSV PQDETEAVLH SDSRLGDIED VQPFIQARFD Q
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