Gene Huta_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1564 
Symbol 
ID8383843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1535009 
End bp1535539 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID644972626 
Productprotein of unknown function DUF1349 
Protein accessionYP_003130472 
Protein GI257052639 
COG category[S] Function unknown 
COG ID[COG3506] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0761212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTGGC GCAACGAACC TACCGAGTGG CAGGAAGACG GCGATCGACT CACTCTTCGC 
ACCGACCCCG GGACCGACTG CTGGCGCGTG ACGGCCCACG ACTTCGTTCA GGACGACGCG
CCATTCTATT ATCGCGAGGT CTCGGGTGAT TTTTCTGCTC GGGTGACCGT CACCGGCGCG
TACGCCGACC AGTACGATCA GGCCGGGCTG ATGGTCCGCG AGGACGAGTC GACCTGGCTG
AAGACCGGCA TCGAGTACGT CGACGGGGGA CAACAGGCAA GCACTGTCAT CACTCGCGAG
TTCTCCGACT GGTCGGTCTC GCCGCTGGAT GACGACCCCG AGTCCGTGTC CGTCCGCGTC
GAACGTACCG GCGAGACCGT CGAGACGTTC TTCTCCAGGG ACGGCGAGGC CTTCCAGATG
CTCCGTCAGG GATACCTCAC CGAGGCCGAG ACGCTCTCTG TCGGGATGAT GGCCGCAGCG
CCTACTGGTG AGGGGTTCGA CGTGACCTTC GAGGACTTTT CGATCGAGTG A
 
Protein sequence
MAWRNEPTEW QEDGDRLTLR TDPGTDCWRV TAHDFVQDDA PFYYREVSGD FSARVTVTGA 
YADQYDQAGL MVREDESTWL KTGIEYVDGG QQASTVITRE FSDWSVSPLD DDPESVSVRV
ERTGETVETF FSRDGEAFQM LRQGYLTEAE TLSVGMMAAA PTGEGFDVTF EDFSIE