Gene Huta_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1542 
Symbol 
ID8383821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1517362 
End bp1518129 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID644972604 
Producthypothetical protein 
Protein accessionYP_003130450 
Protein GI257052617 
COG category[S] Function unknown 
COG ID[COG1751] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAGA CTACCAAGAC CCACGACCCC AGGGAGAGAC ACACCCGTCA TGCACGTACT 
TCCCGTGGAC CGCCCGGGAA GTCACGTGCT TGGGGGCCGG AGCAGGTGCA ATGGAAGGAT
CCGTTCCAGT GGATCCACTC GAAACAGACC ATCGGAGCCC GAGAGGGCCG AGTCGAAAAG
CACTCCGGAC AGCCGCAAGA CGGTCAGATC ATGATCCGGA CGGACGACAT GGACACGGAA
GAACTGCTCG ACCGAGCGGC AACCTACGCC AGCGATCACG ACGTCGACGC CGTCTGTGTC
GCCTCGACGT CCGGCGAAAC GGGCGCGGCG GCCGCCGAGC GTTTCGGCGA AGATCTCGTC
GTCGTCGGCC ACTCGTATGG CTTCGACGAG CCGAACGAAC AGGAACTCGA CGCCGAGCAC
GTCGAGACGA TCGAGGCGGC CGACGGTGAC GTCTTCGTCG GCCCGATGGC GTTCAGTAAC
GTCGGCTCGG CAGTTTCCGA GCGCGACGGC TACGCGACAC ACGAAGTCAT CGCTGACGTC
CTCCGGCTGT TCGGCCAGGG GACGAAAGTC GCCGTGGAGT GTCCGCTGAT GGCGTGCGAT
GCGGGGCTGG TCGACAGCGG GTCGCGCGTG CTCTCGATCG GCGGGACCGG TAGCGGTGCG
GACACCGCCT TGCTGGTCAA GGCGGCCAAC TCCCGGGACT TCTTCGACGC GCGCGTCCTC
GACGTGGTCG CCAAGCCGGC CGATGCGGCG AACCTCATCT ACTGGTGA
 
Protein sequence
MSQTTKTHDP RERHTRHART SRGPPGKSRA WGPEQVQWKD PFQWIHSKQT IGAREGRVEK 
HSGQPQDGQI MIRTDDMDTE ELLDRAATYA SDHDVDAVCV ASTSGETGAA AAERFGEDLV
VVGHSYGFDE PNEQELDAEH VETIEAADGD VFVGPMAFSN VGSAVSERDG YATHEVIADV
LRLFGQGTKV AVECPLMACD AGLVDSGSRV LSIGGTGSGA DTALLVKAAN SRDFFDARVL
DVVAKPADAA NLIYW