Gene Huta_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1523 
Symbol 
ID8383802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1499885 
End bp1501024 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID644972585 
Product2-methylcitrate synthase/citrate synthase II 
Protein accessionYP_003130431 
Protein GI257052598 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.297697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACG AGCTCAGAAA GGGACTGGAG GGAGTGCTGG TCGCCGAATC GTCGCTGAGC 
GACATCGACG GCGAGGAGGG GCGACTCGTC TACCGGGGGT ACGCGATCGA GGATCTCGCA
CGCAACACCT CCTTCGAAGA GGTACTGTAT CTGCTCTGGG AGGGCCACCT CCCGACTGAA
TCCGAACTCG AACCGTTCGA AGAGCAGATG GCCGAGGAGC GGGCGGTCCG CGAGGAGGTA
CTCTCGACGG TCCGGGAACT CGCCGCCGCC GAGGAGAACC CGATGGCCGC CCTGCGGACT
GCCGTCTCGA TGCTGTCGGC CTACGACCCG GACGACTCGA CGGGCGAGGC CGGCGACGGC
GAGATCGCCC AGCGGAAGGG TCGCCGGATC ACCGCGAAGA TGCCGACGAT CGTCGCCGCG
TACAAACGAC TTCGGGACGG CGAAGAGCCC GTCGCACCCC GGACGGACCT GAGCCACGCC
GAGAACTTCC TGTACATGCT CAACGGCGAG GAACCGGCCC AGACCCTCGC GGACGTCTTC
GACATGGCGC TGGTCGTCCA CGCCGACCAC GGGATCAACG CCTCGACGTT CGCCGCGATG
GTGACAGCCT CGACGCTGTC TGATCTCCAC AGTTCGGTCA CCAGCGCCAT CGGCGCACTG
AAGGGAGGAC TCCACGGCGG CGCGAACCAG AACGTGATGC AGATGCTGCT TGAACTCGAC
GAGAGCGACC TGACGGCCGT CGAGTGGGCC CGTGAGGCCG TCGAGTCCGG CGATCGTATC
CCCGGATTCG GCCACCGCGT CTACGACGTC AAAGACCCAC GGGCGAGGAT CCTCAGTGCC
AAGTCCAAGG CGCTGGGCAA GGCCGCCGAC GAACTCAAAT GGTACTCTTA CTCTCGCGCC
ATCGAGGAGT TCATGGCCAA GGAGACCGGC ATCGCGCCCA ACGTCGACTT CTACTCGGCG
TCGATGTACT ACGAGATGGG CATCCCGATT GACCTCTATA CGCCCATCTT CGCGATGAGT
CGCGTCGGTG GCTGGGTCGC CCACGTCCTC GAATACCAGG AAGAGAACCG CCTCATCCGC
CCCCGAGCGC GTTACGTCGG TCCGGAAGAT CGGGAGTTCG TCCGGATCGA GCAGCGGTAG
 
Protein sequence
MPDELRKGLE GVLVAESSLS DIDGEEGRLV YRGYAIEDLA RNTSFEEVLY LLWEGHLPTE 
SELEPFEEQM AEERAVREEV LSTVRELAAA EENPMAALRT AVSMLSAYDP DDSTGEAGDG
EIAQRKGRRI TAKMPTIVAA YKRLRDGEEP VAPRTDLSHA ENFLYMLNGE EPAQTLADVF
DMALVVHADH GINASTFAAM VTASTLSDLH SSVTSAIGAL KGGLHGGANQ NVMQMLLELD
ESDLTAVEWA REAVESGDRI PGFGHRVYDV KDPRARILSA KSKALGKAAD ELKWYSYSRA
IEEFMAKETG IAPNVDFYSA SMYYEMGIPI DLYTPIFAMS RVGGWVAHVL EYQEENRLIR
PRARYVGPED REFVRIEQR