Gene Huta_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1477 
Symbol 
ID8383756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1455620 
End bp1456573 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content65% 
IMG OID644972540 
ProductEndo-1,4-beta-xylanase 
Protein accessionYP_003130386 
Protein GI257052553 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATA CCCTGCGAGA TGTGGCAGAC GACAACGACA TCAAAATCGG CGCAGCGGCC 
GCAGCCGATC CGATCCGAGG GGACTTCCAG TATCGGGACG CCCTGCGGGA GTTCAACGCC
GTCACGGCCG AGAATGCCAT GAAGATGGGG CCGCTACGAC CCGACGAGCA TACGTATGAC
TTCACGGACG GCGACCTGAT CGCCGAGTTC GCCCGCGAAC ACGACATGTA CTTCCGCGGT
CACGTGCTGG TCTGGCACAA CCAGCTGCCG GAGTGGCTAC TCCCCTTCCA GTACACCGAC
CGGGAACTCC GCCGCTTGCT CGAAGACCAC GTCCGCACGG TCGCCGCGCG GTACGCCGGC
GACGTCGACA CCTGGGACGT CGTCAACGAG GCCGTCGCCG ACGACGGCGG GTTGCGCGAG
ACGCCCTGGC TGCGAGCCTT TGGCGAGGAG TACCTCGACA AAGCCTTCGA GTGGGCCCAC
CAGTCGGCAC CCGAGGCCGA CCTCTTCTAC AACGACTACG GCGCGGACGG CATCAACGAC
AAGTCCGACG AGATCTACGA GATGGTCTCC GGAATGCTCG ATCGAGGAGT CCCGATCGAC
GGCGTCGGCC TCCAGCTGCA CGCACTGCAC GACCCCGTCG ATCCCGACTC GGTCGCCGAG
AACATCGAAC GCTTCAAAGA TCTCGGCCTG GCGGTCGAGA TCACCGAGAT GGATGTCGCC
TACACGGCCG AGGATCCGCC CGAGGACCAT CAGGAAGTCC AGGCCGACTA CTACCGCGAG
GTCGTCGAGA AAGCCATGGC TGCCGGCTGT GACACCTTCG TCATCTGGGG TGTCGCCGAC
CACCACTCCT GGATCCCCCA CTTCGACGAC ACCCTGACCG ATGACCCGCT CCTGCTGGAC
GACGGCTACG ACCGCAAACC CGCCTACGAC GCGATCGTCG ACCTGCTGTC CTGA
 
Protein sequence
MSDTLRDVAD DNDIKIGAAA AADPIRGDFQ YRDALREFNA VTAENAMKMG PLRPDEHTYD 
FTDGDLIAEF AREHDMYFRG HVLVWHNQLP EWLLPFQYTD RELRRLLEDH VRTVAARYAG
DVDTWDVVNE AVADDGGLRE TPWLRAFGEE YLDKAFEWAH QSAPEADLFY NDYGADGIND
KSDEIYEMVS GMLDRGVPID GVGLQLHALH DPVDPDSVAE NIERFKDLGL AVEITEMDVA
YTAEDPPEDH QEVQADYYRE VVEKAMAAGC DTFVIWGVAD HHSWIPHFDD TLTDDPLLLD
DGYDRKPAYD AIVDLLS