Gene Huta_1409 details

Gene Information

• Locus tag: Huta_1409
• ID: 8383688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1378033
• End bp: 1378611
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644972472
• Product: glutamine amidotransferase subunit PdxT
• Protein accession: YP_003130318
• Protein GI: 257052485
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.794168
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATTA CCGCCGGCGT GATCGCCGTC CAGGGGGATG TGAGCGAACA CGCGACCGCC 
GTCGAGGCGG CCGCAGCGGC CCACGACCAG ACCACCGAGA TCGTCGAGAT ACGCGATTCA 
GGCCGCGTAC CTGACTGTGA CGTCCTGCTT GTTCCCGGTG GGGAGTCGAC GACGATCTCC 
CGGCTGCTCG CCGAGGAGGG GATCGCCCCG GAGATCCGCG ACCACGTCGC GGCCGGCAAG 
CCCATGCTCG CAACGTGTGC CGGCCTGATC GTGGCGGCCC GGGACGCCGG GGACGACCGC 
GTCGAGACGC TGGACGTTCT GGACGTCGCC GTCGAGCGCA ACGCCTTCGG GCGGCAAAAG 
GACAGCTTCG AGGCCCCGCT GGACGTCGAC GGGCTCGACG ATCCCTTCCA CGCAGTGTTC 
ATCCGTGCGC CGGTCATCGA GGAGGTCGGC GACGCCGACG TCCTCGCCAC CTGGGAGGGT 
CGCCCGGTCG CAGTCCGTGA CGGTCCCGTC GTTGGGACGG CGTTCCACCC AGAGTTGACG 
GGCGATCACC GGATCCACGA CCTCGCGTTC TTCGAGTGA 

 

Protein sequence

MTITAGVIAV QGDVSEHATA VEAAAAAHDQ TTEIVEIRDS GRVPDCDVLL VPGGESTTIS 
RLLAEEGIAP EIRDHVAAGK PMLATCAGLI VAARDAGDDR VETLDVLDVA VERNAFGRQK 
DSFEAPLDVD GLDDPFHAVF IRAPVIEEVG DADVLATWEG RPVAVRDGPV VGTAFHPELT 
GDHRIHDLAF FE