Gene Huta_1273 details

Gene Information

• Locus tag: Huta_1273
• Symbol: radA
• ID: 8383548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: -
• Start bp: 1245090
• End bp: 1246136
• Gene Length: 1047 bp
• Protein Length: 348 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644972332
• Product: DNA repair and recombination protein RadA
• Protein accession: YP_003130182
• Protein GI: 257052349
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02236] DNA repair and recombination protein RadA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCAA CAGAAGATCT CGAAGATCTG CCGGGCGTGG GTCCGGCGAC CGCAGAGAAG 
CTCACCGAGA ACGGCTACGA CTCCTATCAG GGCATCGCCG TCGCGAGTCC CGGCGAATTA 
AGTAACACCG CCGACGTCGG CGAATCGAGC GCGGCGGACA TCATCCAGGC CGCCCGCGAG 
GCCGCCGACA TCGGCGGGTT CGAGAGCGGG GCCGAAGTGC TCGAACGCCG CGAACAGATC 
GGCAAGCTCA CGTGGGGCGT CGAGGAGGTC GACGAGTTGC TCGGGGGTGG CGTCGAGACA 
CAATCGATCA CCGAAGTATA CGGCGAGTTC GGGGCCGGCA AGTCCCAGGT CACGCACCAG 
CTGGCCGTCA ACGTTCAGCT GCCGGCCGAG CACGGTGGAC TGGAAGGCAG TTCGATCTTC 
ATCGACAGCG AAGATACGTT CCGGCCCGAA CGTATCGAGC AGATGGTCGA GGGCCTTGAA 
GACGACGTGA TCGCGGACAC GATGGTTCTC CACGGCGTTG CCGAAGAGGG CGAGGCCGAC 
CCCGCCGACG ACGACCATTT CGACGACCTC ATCGAGTCTA TCCTCGACAA GATCCACGTC 
GCGAAGGCGT TCAACTCCAA CCACCAGATT CTCCTGGCCG AGAAGGCCCA GGAACTCGCC 
AGCGAGGGCC AGGACGAGGA GTTCCCTGTT CGCCTCCTTT GTGTGGACTC CTTGACCGCC 
CACTTCCGGG CGGAGTACGT CGGTCGTGGC GAACTCGCCG ACCGCCAGCA GAAGCTCAAC 
AAGCACCTCC ACGACCTGAT GCGGGTCGGC GACCTCAACA ACACCGCCGT CGTCGTCACG 
AACCAGGTCG CGGCCAACCC CGATTCCTTC TTCGGTGACC CGACCCAGCC CATCGGCGGG 
AACATTCTGG GCCACACCTC GACGTTCCGA CTCTACCTCC GGAAATCGAA GGGTGACAAG 
CGGATCGTCC GCCTGGTCGA CGCGCCGAAC CTGCCCGACG GCGAGGGCGT CATGCGCGTC 
GAAGGTGGCG GCCTGATGGC GGAGTAA 

 

Protein sequence

MAATEDLEDL PGVGPATAEK LTENGYDSYQ GIAVASPGEL SNTADVGESS AADIIQAARE 
AADIGGFESG AEVLERREQI GKLTWGVEEV DELLGGGVET QSITEVYGEF GAGKSQVTHQ 
LAVNVQLPAE HGGLEGSSIF IDSEDTFRPE RIEQMVEGLE DDVIADTMVL HGVAEEGEAD 
PADDDHFDDL IESILDKIHV AKAFNSNHQI LLAEKAQELA SEGQDEEFPV RLLCVDSLTA 
HFRAEYVGRG ELADRQQKLN KHLHDLMRVG DLNNTAVVVT NQVAANPDSF FGDPTQPIGG 
NILGHTSTFR LYLRKSKGDK RIVRLVDAPN LPDGEGVMRV EGGGLMAE