Gene Huta_1216 details

Gene Information

• Locus tag: Huta_1216
• ID: 8383491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 1188739
• End bp: 1189428
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 644972275
• Product: TrkA-N domain protein
• Protein accession: YP_003130125
• Protein GI: 257052292
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATATCA TCATCGTCGG CGCGGGCGAT ATCGGCACAC CGCTGATCGA CATCGCGACG 
CGATCGGGCA ACGAGGTCGT CGTCATCGAG CACAACACCG AACGGGCCAA CCGAGCGGCC 
GACCGCTTCG ACTGTCTCGT CCTCGAAGCC GACGCCACCA CCAACGCAAC CTTAGAGGAC 
GCCGGGGCCG CACAGGCCGA CGCGATCGTC TCGACGACCG ACCGGGACGC GACGAACATC 
ATGGTCAGTC TGCTCGCAAA GGAGTACGAC ATCCCGGCGA TCCTCTCGGT CGTCCACAAC 
CCCGAGCACA TGAACCTCTT CGAGCAGATC GGGGTGAACA CGATGGAGAA CCCCCAGGAA 
CTCATCGCGG AGTACCTCTA TCGGGCGGTC GCACGCCCCG CCATCGTCGA CTACATGCGC 
ATCGGCGAGA ACGCCGAAGT CTTCGAGATC ACCGTCACCG AGAACGCACC TGTCGCGGGG 
AAGACTCTCC AGGAGACCGC CGACGAGGAC CTGCTCTCTG ATGACGTCCT CGTCGTCGCG 
ATCGAACGCG AGAGGGCCAG CGAGCCGATC ACGCCGCGCG GGAACACGAC CATCCACGCG 
GGCGATCTCC TGACCGTCTA CTCCGCCGTC GGTGCCGAAC CGGCGATCAC GGACATCTTC 
GGCCACTACG AGGATCGGAT CGAGGACTGA 

 

Protein sequence

MYIIIVGAGD IGTPLIDIAT RSGNEVVVIE HNTERANRAA DRFDCLVLEA DATTNATLED 
AGAAQADAIV STTDRDATNI MVSLLAKEYD IPAILSVVHN PEHMNLFEQI GVNTMENPQE 
LIAEYLYRAV ARPAIVDYMR IGENAEVFEI TVTENAPVAG KTLQETADED LLSDDVLVVA 
IERERASEPI TPRGNTTIHA GDLLTVYSAV GAEPAITDIF GHYEDRIED