Gene Huta_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1207 
Symbol 
ID8383482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1179332 
End bp1179928 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content69% 
IMG OID644972266 
Productribonuclease H 
Protein accessionYP_003130116 
Protein GI257052283 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.623117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTTA TCGAGTGCGA CCCGGCGGCC GCCCGCGAAC GGCTGGAAGC CGCGGGCATC 
ACCGTCGAGT CGGGCAACAC CGATCACGAG CGCTGGCGGG CCGAATCGGG CGGAGCGACG 
GCCGTCGCCT ACGAGGGAAA AGTCGTCGTG CAGGGCAGCG ATCCGGGCAA ACTGACCGGG 
GTCCTGACCG ACGAGGGTGG TCGCGCGCAC GTCTACGTCG ACGGGGCCTC GCGTGGCAAC 
CCCGGCCCGG CGGCCATCGG CTGGGTGATC CTCACCGGCG ACGGCGGCAT CGTCACCGAG 
GGGGGCAAAC GCATCGGCTC GACGACCAAC AACCGCGCGG AGTACGAGGC GCTGATCCAC 
GCCCTTGAGA TCGCCGCCGA CTACGGCTTC GATTCCGTCG AAGTCCGCAG CGACTCCGAA 
CTGGCCGTCC GCCAGGTTCG CGGTGAGTGG GACACGAACG ATCCCGACCT CCGCGAGCGC 
CGCGTCCGGG TGCGGGAGCT GTTTCGCGAA TTCGACGACT GGTCGATCGA ACACGTCCCC 
CGGGAGATCA ACGAGCGCGC CGATGCTCTC GCCAACGAGG CGTTCGAGGA TGGGTAA
 
Protein sequence
MPVIECDPAA ARERLEAAGI TVESGNTDHE RWRAESGGAT AVAYEGKVVV QGSDPGKLTG 
VLTDEGGRAH VYVDGASRGN PGPAAIGWVI LTGDGGIVTE GGKRIGSTTN NRAEYEALIH 
ALEIAADYGF DSVEVRSDSE LAVRQVRGEW DTNDPDLRER RVRVRELFRE FDDWSIEHVP 
REINERADAL ANEAFEDG