| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1187 |
|---|
| Symbol | |
|---|
| ID | 8383462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1160794 |
|---|
| End bp | 1161765 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644972246 |
|---|
| Product | Transcription factor TFIIB cyclin-related |
|---|
| Protein accession | YP_003130096 |
|---|
| Protein GI | 257052263 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0221286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA CCAACACCAG AACCCGACTC GATCAGTCGA CGAACGTCAC AGAAGACGAA
GCAGAGACCT CGGACGTCCA GTGTCCCGAG TGTGACGGCA AACTCATTTC GGACACCGAG
CGTGGCGAGA CCGTCTGCCA GGGATGCGGA CTCGTCGTCG AGGAAGACGA GATCGATCCC
GGTCCGGAGT GGCGCGCGTT CGACGCCAAG GAGAAAGACC AGAAGTCCCG CGTCGGTGCC
CCGACGACGA ACATGATGCA CGACAAGGGG CTGTCGACCA ACATCGACTG GCGTGACAAG
GACGCCTACG GCAACTCGCT GGGGTCGCGC CAGCGTGAAA AGATGCAGCG CCTCCGGAAG
TGGAACGAGC GCTTCCGGAC GCGTGACTCC AAGGAGCGCA ACCTCAAGCA GGCGCTGGGC
GAGATCGACC GCATGGCAAG CGCGCTTGGA CTCCCGGAGA ACGTTCGCGA GACCGCGTCG
GTCATCTATC GGCGGGCACT CGACGAGGAT CTGCTCCCCG GTCGATCCAT CGAAGGTGTC
TCGACGGCAT CCGTCTACGC TGCCGCCCGT CAGGCTGGCG TCCCGCGAAG CCTGGACGAA
CTCACCGACG TCTCCCGGGT CGAGAAAGAC GAGATCGCCC GCACGTATCG CTACGTCGTC
CGTGAACTCG GCCTCGAAGT CCGCCCGGCC GATCCCGAGA GCTACGTCCC ACGGTTCACC
TCGGATCTCG AGCTGAGCGA GGAGGCCGAG CGCCGTGCGC GAGAACTGCT CGCCAACGCC
AAAGAGGAGG GCGTCCACTC CGGAAAGAGC CCTGTCGGGC TCGCGGCCGC CGCGATCTAC
GCCGCCTCGC TGTTGACCAA CGAGAAGACC ACCCAGGCTG CAGTCAGCGA GGTCGCGGAC
ATCTCCGAAG TCACGATCCG CAACCGCTAC CACGAACTGC TGGAAGCCGA GCAGTCGATC
CCGACCGCCT GA
|
|---|
| Protein sequence | MSETNTRTRL DQSTNVTEDE AETSDVQCPE CDGKLISDTE RGETVCQGCG LVVEEDEIDP
GPEWRAFDAK EKDQKSRVGA PTTNMMHDKG LSTNIDWRDK DAYGNSLGSR QREKMQRLRK
WNERFRTRDS KERNLKQALG EIDRMASALG LPENVRETAS VIYRRALDED LLPGRSIEGV
STASVYAAAR QAGVPRSLDE LTDVSRVEKD EIARTYRYVV RELGLEVRPA DPESYVPRFT
SDLELSEEAE RRARELLANA KEEGVHSGKS PVGLAAAAIY AASLLTNEKT TQAAVSEVAD
ISEVTIRNRY HELLEAEQSI PTA
|
|---|
| |