Gene Huta_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1182 
Symbol 
ID8383457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp1157097 
End bp1157771 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID644972241 
Product3-dehydroquinate dehydratase 
Protein accessionYP_003130091 
Protein GI257052258 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0710] 3-dehydroquinate dehydratase 
TIGRFAM ID[TIGR01093] 3-dehydroquinate dehydratase, type I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCA GTTCGTTCCG ACTCGCGGCG TCGACGGCGG ATCTCACCGA GGAGCCGGCT 
GCTCGCGAGC ACGCCGACCT GGTCGAGTTG CGGATGGATC TGGCCGACGA ACCACTCACG 
CAGCTCTCGA ACTACGACGG CGAGCTGCCG CTGCTCGTGA CCAACCGTCC CGAGTGGGAG 
GGTGGCGAGG CCGCGGACGC TGGTCGCCTC GCCGCGCTCG AAGCGGCCGT CACCGACGAC 
GCCGTCGCCG CGGTCGATGT CGAACTCGCG ACCGCGCGTG ACGGTGACGC CGACGGGCTG 
ATCGAGACCG CCCACGAGCA CGACGTTGCC GTGGTCGTCT CCACGCACGA TTTCGAGGGG 
ACGCCGGGGA TGGGCGACCT TCAGGAGATG TTGCGTGAAG CTGCGCAATT CGGCGACGTG 
GGCAAACTCG CCGTCACCGC CGAGACGCCA GATGACGTGC TCGATTTGCT GGTGGCGACG 
CGGGCGGCCA CCGTCGAAGG CCACACCGTG GCGACGATGG CGATGGGCGA GGCCGGCCGC 
CACTCCCGGG CGGTCGCCCC GCTGTACGGC TCCCGGATCG GTTATGCACC GGTCGAGCCC 
ACCAACGCGA CCGCACCGGG GCAGTATGAT CTCGCGACGC TCGCCGATCT CGTCGCGGAA 
CTCGGCGGCC AGTGA
 
Protein sequence
MNFSSFRLAA STADLTEEPA AREHADLVEL RMDLADEPLT QLSNYDGELP LLVTNRPEWE 
GGEAADAGRL AALEAAVTDD AVAAVDVELA TARDGDADGL IETAHEHDVA VVVSTHDFEG 
TPGMGDLQEM LREAAQFGDV GKLAVTAETP DDVLDLLVAT RAATVEGHTV ATMAMGEAGR 
HSRAVAPLYG SRIGYAPVEP TNATAPGQYD LATLADLVAE LGGQ