| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1071 |
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| Symbol | |
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| ID | 8383345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1047312 |
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| End bp | 1048781 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644972136 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003129987 |
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| Protein GI | 257052154 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTAC TAAGGAAGAT TCTATCCGAT TCTGCCTTTA CTGCTTTGTT GTCGATTATC
AATATACTGA GGGGATTCGT CGTCCTCTTC CTGATCGTCA ATTTGCTGGG TCCAGATAGT
TACGGGATTT GGGTGACCAT CATCGCGGCA GTTTCCATGG TCAGCATGAC GGCCAGCGTT
CATTTACATG GTGCGTTGAT CAGATACACC TCATCAGACC CCTCAAACAA CCAAACTTAC
AGCGACGTGC TATCTCTCGC GACACTAATT GGGTTGGTGA CGTTCGGTAT CGGAGCAATT
GGAAGCGTAA TTTTCTCACT GTATTCTCCT ACTGTATTCG GGTTCGATAC TCCCCACGAC
CTGGTATTCG CCACGAGCAC CCTCATCGCA GTCCGCATTC CGTTGAAAGT AAACTTGAAT
CACCCTCGAG CGAAGGGCTT TGTCAAGCAA TATGAGGGAG TCCGGATCCT GCGTAACGTA
ATGGAAGTCA CAGCCCTCGC AATTATATTT CTGCTGGGAG GAAATATCCT GGCTGGGATC
TGGGGTATCG TTGGTGTGTC CGTATTTTTG AACGCGGGGA TATTCAGTTA CGTATACATA
CATAGCGGCT TGCCCCGCCC GGAAGTCCAC AACGTTGGAA AGTACATCCG GTACGGCGTC
CCCATGGTAC CGGCGGCTCT GTCATCCTCC CTGCTGGCTG ACATCGACAA ATACTTTCTC
CTGTTCTTAC TCGGCCCAGC ACCTGTTGGG ATATACAGTG TCGCTGAAAG AGTCTGCAAA
CCGATCGTGA ACCTGACTGG GATCTTCAAC TCCACACTGT ATCCCACGAT CGCAAGCGCC
TGGGACCAGG GAGATTACGA AGTGATAGAG AAAGCGTACG AGTACATTTT CCGGTATTAT
ACCATTTTAG CATTTCCAGG TGCGGTAGGA TTGGTCCTCG TCGCCGAGCC ATTGTTGAAT
ATAATATCCA CCACCGAAAT AGCTCGACAG GCCGTCCCAC TTGTGCCGAT CTTCATTCTT
GGTTACTTCC TCAAAGGATA TGACAACCCA TTGAGGTACA TTCTGACCTC CGTCGAACGA
ACACGAACTA TTGGGATTGC AGTCACCTTA TCGCTGCTCG TAAATGTGAT CCTGAATCTC
ACGTTGATAC CGACGATGGG ACTGTCAGGA GCGGCAATCG CAACGTTATC AGCACAGGGA
GTTCTATTCT TTATGATCCT GTACGTCTCG TTCCAAGAAG TCAGATTCGA GATTCCGTGG
ATCACCTTGG TCCGCTGTTC TGTAGCAACG GTAGTGATGG CAGTCATCCT GATGCTACTC
GATTTAGGAA ACTCTCCAGC ATCGGAGATG CTTCTCGACA TAGGAGTTGG GGGACTCTCC
TATTTCGCGG TGTTGTTCCT CATCGGAGAG TTCTCAAGTG AAGACATCAA ACTGGTGAGA
GAGAAACTCC AGAGCAGTTT GCAATTTTAG
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| Protein sequence | MSVLRKILSD SAFTALLSII NILRGFVVLF LIVNLLGPDS YGIWVTIIAA VSMVSMTASV
HLHGALIRYT SSDPSNNQTY SDVLSLATLI GLVTFGIGAI GSVIFSLYSP TVFGFDTPHD
LVFATSTLIA VRIPLKVNLN HPRAKGFVKQ YEGVRILRNV MEVTALAIIF LLGGNILAGI
WGIVGVSVFL NAGIFSYVYI HSGLPRPEVH NVGKYIRYGV PMVPAALSSS LLADIDKYFL
LFLLGPAPVG IYSVAERVCK PIVNLTGIFN STLYPTIASA WDQGDYEVIE KAYEYIFRYY
TILAFPGAVG LVLVAEPLLN IISTTEIARQ AVPLVPIFIL GYFLKGYDNP LRYILTSVER
TRTIGIAVTL SLLVNVILNL TLIPTMGLSG AAIATLSAQG VLFFMILYVS FQEVRFEIPW
ITLVRCSVAT VVMAVILMLL DLGNSPASEM LLDIGVGGLS YFAVLFLIGE FSSEDIKLVR
EKLQSSLQF
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