Gene Huta_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1064 
Symbol 
ID8383338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1037364 
End bp1038425 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content47% 
IMG OID644972129 
Productprotein of unknown function DUF354 
Protein accessionYP_003129980 
Protein GI257052147 
COG category[S] Function unknown 
COG ID[COG1817] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA CGAATACAGC GTGGGTGGAC CTGGTGAGTC CATCCCACCC ATTCTTTTTC 
AAGTCACTAC TGGATGAGCT CCCGGAACTG AATCGGAACG TGACTGTCCG ACAGAAAACA
GAAACCGTTG GATTGGCCGA TTCTGCCGGA TTTGATTACG ACATTTTGGG TCGAGACTTC
GATAATACAT TCCTGCGAAA AGTTGGAATT CCACTTCGAA CAATACAAGC GACACTTCAG
GCCCCGGATG CCGACATCTC GCTGTCCTCC CGAAATGCGA TGTGTGTCCT CGCTTCGAAG
GCTCGTGGAA TCCCCTCTAT CCATTTCACT GATAACGATA TTACGGCTCA TGTGGATGGA
TTACACATTG AAAAACTGTA CAATCGATTC GAAGCTCAAG CAACTCATAA CGTCGTCCCA
GCTGCATTTG ATACCAATGA ATTGACTCGC TGGGGAGCTA CTTCTGAGCA AATCCACACG
TACGACGGGT ACAAGGAAGA CATCTATATC GCCAACTTTG AACCAGATAC AACGTTCCAA
GACCAACTTC CGTTCAATGA CTACATTGTG ATCCGTCCCG AAGCACTAGG TGCCGCATAC
GTCGATACCG ATCAATCGAT CATCCCAGAA TTACTTGAAA GAGCAACGGA TGAAGGACTT
AACGTAGTTT ACCTCCCTCG CGGACGAGAT GATGAAGAAT ATGCAGAGCC ATTCTCATCT
TCTGGTGTAT ATATTCCCTC GGAAACTTTG GACGGACTTC AACTCGCATG GTACTCGGAT
GGGGTTCTTA CTGGTTCTGG AACGATGGCT CGAGAGGCAG CGTGTATGGG GATACCAGCT
GTTTCCTTTT TCCCTGAGAC TCCTCTTTCC GTAGATCAGG AGATGATTAA CGATGGCATG
ATTTTCCATT CTCGTGACTC CCAGGCAATT GTTGAATTCA TTGACTCACA ATCTACACGA
GATCGGGAAG CAGATATTTC TCGATCCGAA GACGTCCTTA GTGATGTTGT TGCTACGGTC
AACTCAATAA TCAACTCCGA AACCACCAAA AACGAACTAT GA
 
Protein sequence
MSDTNTAWVD LVSPSHPFFF KSLLDELPEL NRNVTVRQKT ETVGLADSAG FDYDILGRDF 
DNTFLRKVGI PLRTIQATLQ APDADISLSS RNAMCVLASK ARGIPSIHFT DNDITAHVDG
LHIEKLYNRF EAQATHNVVP AAFDTNELTR WGATSEQIHT YDGYKEDIYI ANFEPDTTFQ
DQLPFNDYIV IRPEALGAAY VDTDQSIIPE LLERATDEGL NVVYLPRGRD DEEYAEPFSS
SGVYIPSETL DGLQLAWYSD GVLTGSGTMA REAACMGIPA VSFFPETPLS VDQEMINDGM
IFHSRDSQAI VEFIDSQSTR DREADISRSE DVLSDVVATV NSIINSETTK NEL