Gene Huta_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1055 
Symbolcdc6 
ID8383329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp1025792 
End bp1026919 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID644972120 
Productcell division control protein 6 
Protein accessionYP_003129971 
Protein GI257052138 
COG category[L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1474] Cdc6-related protein, AAA superfamily ATPase 
TIGRFAM ID[TIGR02928] orc1/cdc6 family replication initiation protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.336703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG ACCCCGAGGA GGGGATGCTC TCCTGGGACG AATCCGTCTT CCGGGACGAG 
CACGTCTTCG AGATCGACTA CGTCCCCGAG ACGTTCCGCC ACCGCGAGAG CCAGATGGAG
AGCCTGAAGT ACGCCCTCCG GCCGGCCGTC CGCGGATCCC GGCCACTCAA CGTCATCGCC
CGCGGGCCGC CGGGGACGGG CAAGACGACG GCGGTCCAGA AACTCTACGG CGAACTCGGC
TCCCAGACGG ACGTCCGGGT CGCCCGCGTC AACTGTCAGG TCGATTCGAC GCGATATGCA
GTGTTTTCGC GGCTGTTCGA GAGCGTTTTC GAGTACGAAC CGCCGGCCAG CGGCATCTCC
TTCAAGAAAC TCTTCGGCCA GATCACCGAG AAACTCGTCG ACGAGGAGGA GGTCCTGGCC
GTCGCCCTGG ACGATATCAA CTATCTCTTC TACGAAGGTG AGGCCTCCGA CACCCTCTAC
TCGCTCCTTC GCGCCCACGA GGCCCACTCC GGGGCGAAGA TCGGCGTGGT CGTCGTCTCC
TCGGATCTGG ACTTAGACGT CATCGAGGAA CTCGACGGTC GCGTCCAGAG CGTTTTCCGC
CCGGAGGAAG TCTACTTCCC GAAGTACGAC GAACCCGAGA TCGTCGACAT CCTCGACGAG
CGTGTCGAGC GTGGGTTCCA CGAAGGCGTC GTCGACGCGC CGATTTTGGA CCGCGTCGCC
GAACTCACCG CCGACCAGGG CGGGGACCTC CGGGTCGGCA TCGACCTGTT GCGCCGGGCG
GGGCTGAACG CCGAGATGCG TGCCAGCAAA CAGATCGAGC GCGAGGACGT CGAGGCGGCT
TTCGAGAAGT CCAAACACGT CCACCTCTCT CGGCATCTCA AGGGACTCTC CGACAGCGAA
CAGACGCTTT TGGCGGTGAT CGCCGACCAC GAGGGCGAAC TCGCGGGCGA CGTCTACGAG
ACGTTCGCCG AGGAGACCGA CCTCGGGTAC ACCCGGTACT CGGAGATCAT CAAGAAACTC
GACCAACTCG GCCTCATCGA GACCAGTTAC ACCAGCGTCG ACGGCCGGGG GCGTTCGCGG
GAACTCTCCT TGCAGTACGA GCCCGAAGCC ATCACGGACC GGCTATAG
 
Protein sequence
MTDDPEEGML SWDESVFRDE HVFEIDYVPE TFRHRESQME SLKYALRPAV RGSRPLNVIA 
RGPPGTGKTT AVQKLYGELG SQTDVRVARV NCQVDSTRYA VFSRLFESVF EYEPPASGIS
FKKLFGQITE KLVDEEEVLA VALDDINYLF YEGEASDTLY SLLRAHEAHS GAKIGVVVVS
SDLDLDVIEE LDGRVQSVFR PEEVYFPKYD EPEIVDILDE RVERGFHEGV VDAPILDRVA
ELTADQGGDL RVGIDLLRRA GLNAEMRASK QIEREDVEAA FEKSKHVHLS RHLKGLSDSE
QTLLAVIADH EGELAGDVYE TFAEETDLGY TRYSEIIKKL DQLGLIETSY TSVDGRGRSR
ELSLQYEPEA ITDRL