Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1055 |
Symbol | cdc6 |
ID | 8383329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 1025792 |
End bp | 1026919 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644972120 |
Product | cell division control protein 6 |
Protein accession | YP_003129971 |
Protein GI | 257052138 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.336703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACG ACCCCGAGGA GGGGATGCTC TCCTGGGACG AATCCGTCTT CCGGGACGAG CACGTCTTCG AGATCGACTA CGTCCCCGAG ACGTTCCGCC ACCGCGAGAG CCAGATGGAG AGCCTGAAGT ACGCCCTCCG GCCGGCCGTC CGCGGATCCC GGCCACTCAA CGTCATCGCC CGCGGGCCGC CGGGGACGGG CAAGACGACG GCGGTCCAGA AACTCTACGG CGAACTCGGC TCCCAGACGG ACGTCCGGGT CGCCCGCGTC AACTGTCAGG TCGATTCGAC GCGATATGCA GTGTTTTCGC GGCTGTTCGA GAGCGTTTTC GAGTACGAAC CGCCGGCCAG CGGCATCTCC TTCAAGAAAC TCTTCGGCCA GATCACCGAG AAACTCGTCG ACGAGGAGGA GGTCCTGGCC GTCGCCCTGG ACGATATCAA CTATCTCTTC TACGAAGGTG AGGCCTCCGA CACCCTCTAC TCGCTCCTTC GCGCCCACGA GGCCCACTCC GGGGCGAAGA TCGGCGTGGT CGTCGTCTCC TCGGATCTGG ACTTAGACGT CATCGAGGAA CTCGACGGTC GCGTCCAGAG CGTTTTCCGC CCGGAGGAAG TCTACTTCCC GAAGTACGAC GAACCCGAGA TCGTCGACAT CCTCGACGAG CGTGTCGAGC GTGGGTTCCA CGAAGGCGTC GTCGACGCGC CGATTTTGGA CCGCGTCGCC GAACTCACCG CCGACCAGGG CGGGGACCTC CGGGTCGGCA TCGACCTGTT GCGCCGGGCG GGGCTGAACG CCGAGATGCG TGCCAGCAAA CAGATCGAGC GCGAGGACGT CGAGGCGGCT TTCGAGAAGT CCAAACACGT CCACCTCTCT CGGCATCTCA AGGGACTCTC CGACAGCGAA CAGACGCTTT TGGCGGTGAT CGCCGACCAC GAGGGCGAAC TCGCGGGCGA CGTCTACGAG ACGTTCGCCG AGGAGACCGA CCTCGGGTAC ACCCGGTACT CGGAGATCAT CAAGAAACTC GACCAACTCG GCCTCATCGA GACCAGTTAC ACCAGCGTCG ACGGCCGGGG GCGTTCGCGG GAACTCTCCT TGCAGTACGA GCCCGAAGCC ATCACGGACC GGCTATAG
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Protein sequence | MTDDPEEGML SWDESVFRDE HVFEIDYVPE TFRHRESQME SLKYALRPAV RGSRPLNVIA RGPPGTGKTT AVQKLYGELG SQTDVRVARV NCQVDSTRYA VFSRLFESVF EYEPPASGIS FKKLFGQITE KLVDEEEVLA VALDDINYLF YEGEASDTLY SLLRAHEAHS GAKIGVVVVS SDLDLDVIEE LDGRVQSVFR PEEVYFPKYD EPEIVDILDE RVERGFHEGV VDAPILDRVA ELTADQGGDL RVGIDLLRRA GLNAEMRASK QIEREDVEAA FEKSKHVHLS RHLKGLSDSE QTLLAVIADH EGELAGDVYE TFAEETDLGY TRYSEIIKKL DQLGLIETSY TSVDGRGRSR ELSLQYEPEA ITDRL
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