Gene Huta_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1005 
Symbol 
ID8383278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp969276 
End bp970292 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID644972069 
Producthypothetical protein 
Protein accessionYP_003129921 
Protein GI257052088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCG AGGCCTTTCC GTCCGTGTCC TTGCACAACG TCGCCGAACT CGCCCCGGCC 
GACTGGACCA ACGGCGGCGG TCATCTCCAT CGGGTCCCGC GGGACGTGGC CGCGAACCTC
AACGTCATGG CCCGCGACCG CGTCCAGAGC CCGACGGGTA GTGAGATTCG GTTCGTCCCC
GACGGCGACG ACGCGACTGT CGAGGTGACG CTCTCGGCTG CGGGGGAGAC GACCGTCCAG
CCCTTCTGGG GGCCGTTCCA GGGGGCCGAA CCGTTCGAGA TCGGCCCGGA CCCTTCGACG
CACACCTTCT CCGTCCCGGA CCGCGTCCGG AACCTCGATC CGGCGGCTGC CGAGGACGCC
GCGTATGACA CCCGAATCTG CCGCCTTCGT TTCGACGCGT GGTCACGGGT TGCGCTCCAC
GACGTCGCCG GTGACGCTCG TCCACCCCGA GACGCAGAAC TCCCCGACAC CCGGTATCTC
GCTTACGGCA CCTCCATCAC CGAGGGGGCG CTCTCGAATC CACACCTGGC GTACGTCGCC
ACCGCCGCTC GACAGCTCGG CGTCGATCCG ATCAACCTCG GCATGGCCGG GTCGGCGTAC
TGCGAACCGG CAATCGCCGA CCACATCGCC GGCCGAGACG ACTGGGACTT CGCCACGATC
GCCGTCTCGG TCAACATGTC GAATCGGGGA TTCACTGTCG AGCAGTTCCG TGAGAGCGCC
GACCAGCTGC TCGATACGGT GGCCGGCGCA CACCCCGAAA AGCCGATCGT CGCCGTCTCG
CTGTTCCCGT ACCATGCCGA TGTCGTTGCG GGCGACGACC CGGAACGAGC GGCGGCCTAC
CGGGAGACGC TTGAGACACT CGTCACCGAA TCGGCCCACG ACAACCTCTC GTTTATCGAC
GGCTCGAAGC TCCTCTCTGT GCCCGGGCTG ATGGACGATA TCCTCCACCC CGGCGACGCC
GGGATGGTCG AGATCGGGCA CAACCTCGCC GAGGAACTCG AGCCGCTCGT CGAGTGA
 
Protein sequence
MQLEAFPSVS LHNVAELAPA DWTNGGGHLH RVPRDVAANL NVMARDRVQS PTGSEIRFVP 
DGDDATVEVT LSAAGETTVQ PFWGPFQGAE PFEIGPDPST HTFSVPDRVR NLDPAAAEDA
AYDTRICRLR FDAWSRVALH DVAGDARPPR DAELPDTRYL AYGTSITEGA LSNPHLAYVA
TAARQLGVDP INLGMAGSAY CEPAIADHIA GRDDWDFATI AVSVNMSNRG FTVEQFRESA
DQLLDTVAGA HPEKPIVAVS LFPYHADVVA GDDPERAAAY RETLETLVTE SAHDNLSFID
GSKLLSVPGL MDDILHPGDA GMVEIGHNLA EELEPLVE